Gene BBta_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2960 
Symbol 
ID5155279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand- 
Start bp3081841 
End bp3082461 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID640557837 
ProductGTP cyclohydrolase 
Protein accessionYP_001238991 
Protein GI148254406 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.666668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAACA CAGCCAAGAA GCTTCCCTTC GCCTGCGACC CGGTCCGCGT TACCCAGGAC 
GATGTCGAAG ACGCCATTCG CACCATCCTG ACATGGATCG GTGAAGACCC TTCGCGCGAG 
GGTCTCTCCG AGACGCCGGC GCGTGTCGCC CGCGCCTATA AGAGCTACTT CGCCGGTTAT 
GACCAGAACC CTGAAGAGTA TCTGCGCAAG ACCTTCGAAG AAACGGCCGG CTATGACGAG 
ATGGTGCTGC TGCGGAACAT CCCGTTCCAG AGCCATTGCG AGCATCACAT GGCGCCGATC 
ATCGGCCGCG CCTGGGTCGG CTACGTTCCC CGCAGCCGGG TCGTCGGCAT CTCCAAGCTC 
GCCCGCGTCG TCGAGGCCTA TGCCAGCCGG CTGCAGATCC AGGAGCGTAT GACCGCCGAG 
ATCGCCAACA TCATCGATGA GGTCCTGCAG CCGCAGGGCG TGGCCGTCGT GATCAAGGCA 
GCCCATCACT GCATCAGCTC GCGCGGCGTG AAGAAGCACG GGGTCGACCT CACCACCAGC 
CGCATGCTGG GCTGTTTTCG CAACGATCCG ATGAGCCGGC AGGAGTTCCT GGCCATGGTC 
AATGCGGACC TGAAGGATTG A
 
Protein sequence
MRNTAKKLPF ACDPVRVTQD DVEDAIRTIL TWIGEDPSRE GLSETPARVA RAYKSYFAGY 
DQNPEEYLRK TFEETAGYDE MVLLRNIPFQ SHCEHHMAPI IGRAWVGYVP RSRVVGISKL 
ARVVEAYASR LQIQERMTAE IANIIDEVLQ PQGVAVVIKA AHHCISSRGV KKHGVDLTTS 
RMLGCFRNDP MSRQEFLAMV NADLKD