| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2864 |
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| Symbol | paaX |
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| ID | 5152447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2969904 |
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| End bp | 2970785 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640557743 |
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| Product | phenylacetic acid degradation operon negative regulatory protein paaX |
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| Protein accession | YP_001238897 |
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| Protein GI | 148254312 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00499823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0484276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC CGCTGTCTCG CATCGTCAAC CAGCTCAAGA GCGAGCCGTC GCGCACCGGC
TCGCTGATCA TCACCGTGTT CGGCGACGCC ATCGTGCCGC GCGGCGGCAG TGTCTGGCTC
GGCAGCCTGC TCGCCTTCTT CGAGGGGCTG GCCATCGATG GCAGCGTGGT GCGCACGGCG
ATGTCGCGGC TGACGGCGGA GGGCTGGTTC GAGCGCAGCA AGAGCGGCCG CCACAGCTTC
TATCGCCTGA CCCGGCGCGG CGAGCAGACC TTTGCCGGTG CCACCCGGCA CATCTACGAC
TCCCCGCCGG CCGAATGGAA CGGCAGCTTC GAACTGCTCT TGCTCGGCAG TGCCGATGAT
CGCGAGCAGG CACGCACCGT GCTGCGCGAC GCCGGCTTCG GCAGCCCGCT GCCCGGGGTG
TTCGTGGCTC CCTCCAGCAT CGCCGTCCCC GACGCCGTGG AGGGCGCGAT CCGGCTGCAG
GCCTCCGCCG GATCTGACAT GGCGCGACGG CTGGTGGCGG AGAGCTGGGC GCTGGAGCGG
ACGGCGGAGG CCTACCGCAA GTTCAGCGCG TCTTTTGCCC CCCTCAAATC CAGCATCGAA
CGCGGCGAGG CGCTGTCGGA TGGGCAGGCC TTCACCGCGA GGGTTCTGCT GATCCATCAC
TATCGCCGCA TCGTGCTGCG CGATCCGCTG CTGCCGGCGG AGCTGCTGCC GGGGAACTGG
CCGGGCCGGC AGGCCCGGGC GCTGTGTGGC GAGATCTACC GGCTGCTGCT GCCGGGCTCG
GAGCGCTGGC TCGATGCGCA TGCAATCAAC GAAGCAGGGC CGCTGCCCGC CGCCGCTGCG
GCGCTGCTGC GGCGGTTCGC CGACGTTGAT GAGGCGCCCT GA
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| Protein sequence | MPQPLSRIVN QLKSEPSRTG SLIITVFGDA IVPRGGSVWL GSLLAFFEGL AIDGSVVRTA
MSRLTAEGWF ERSKSGRHSF YRLTRRGEQT FAGATRHIYD SPPAEWNGSF ELLLLGSADD
REQARTVLRD AGFGSPLPGV FVAPSSIAVP DAVEGAIRLQ ASAGSDMARR LVAESWALER
TAEAYRKFSA SFAPLKSSIE RGEALSDGQA FTARVLLIHH YRRIVLRDPL LPAELLPGNW
PGRQARALCG EIYRLLLPGS ERWLDAHAIN EAGPLPAAAA ALLRRFADVD EAP
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