Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2857 |
Symbol | |
ID | 5152060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2963691 |
End bp | 2965289 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640557737 |
Product | putative oligopeptide ABC transporter (substrate-binding protein) |
Protein accession | YP_001238891 |
Protein GI | 148254306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.207734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGAC GCAAATCCCT GCTCATTGCG GCGGCCGCCA TCCTCGTTGG CCTCGCGGGG CTGCCGGCCT CGGCCCAGAC CCTGCGCTAT GCCAACCAGG GCACCCTCAA ATCGCTCGAT CCCTATACTT TCAAGGAATC GACCACGATC GCGCACCACG CCCACGTTTA TGAGGGTCTC ACCGCCCGTG ACAAGGATCT CAAGATCATT CCTGCGCTGG CCGAGAGCTG GGAAACCCCC GAGCCGACCC GCTGGCGTTT CCACCTGCGC AAGGGCGTCA AGTTCCACAA TGGCGAACCG TTCACCGCCG ATGACGTGAT CTTCTCCGCC GACCGCGTTC GCGCCACCGG CTCGAACTTC CTCTCCAACG TTCCGCCCGA CGCCAAGTTC GTCAAGATCG ACGACTACAC CGTCGACGTG AAGCTCGATG CGCCCAATCC CATCCTGATC TCGCAATGGG ATACTTGGTA CATCATGAGC AAGAAGTGGT GCGAGGAGAA CAACTCCGTC GCGCCGACCC CGGTGTCGGC AACGACACCG AGCTACGCGG CACTGCACGA GAACGGCACC GGCCCCTTCA TCATCGAGAG CCATCAGCCC GGTGTGAAGA CGGTGTTCAA GGTCAATCCG AACTGGTGGC GCAAGCCGGA GCACAACATC AAGGAGATCG TGTTCACCAC CATCTCCTCG GACGCCACCC GCGTTGCGGC GCTGCTGTCC GGCGAGGTCG ACATCATCGA GCCGGTGCCG GTGCAGGACA TCGGCCGCGT CGATTCGAGC CCCAATGCCC AGGTCCTGAA GGGACCCGAG CTGCGCACGA TCTTCCTCGG CATGGACGAG AGCCGCGACG AGCTGCTCTA TTCGAACGTC AAGGGCAAGA ACCCGTTCAA GGATATCCGT GTCCGCGAGG CGTTCTACAA GGCCATTGAT GTCGAGCTGA TCAAGACCCG CGTGATGCGC GGCCTGTCGA CGCCGTCGGC GCTGATGATT GCACCTGAAC TGTTCCCGCT GTCCAAGGAG TTCACCAGGC CGAAATACGA TCCGGACGGC GCCAAGAAAC TGCTGACAGA GGCCGGCTAT CCCGACGGCT TCGAAGTCGC TCTGGACTGC CCGAACGACC GCTACGTGAA CGACGCCGCC ATCTGCCAGG CGGTGGTCGG CATGCTCGCC CGGATCGGGG TCAAGGTGAA CCTCAACGCG CAACCGAAGG CGCAGTATTT CGCCAAGGTG CTGAAGCCGG GCGGCTACAA CACCTCGTTC TTCCTGCTCG GCTGGACCCC GTCGTCGATG GACGCCCACA ATGTGATGCA CGACATCATG GGCTGCCGCG AGGATCCCAA GGACCCAACC CGCGGCGAGG CCAATCTCGG CAATTACTGC AACAAGGAGT TCGACGCCCT GACCGACAAG GTCCTGGTCG AGACCGACGC CGCCAAGCGC AATCAGCTGA TCAAGCAGGC GTTCGAGATC GGCATCAAGG ACTACGGCTA TATCCCGGTG CACCAGCAGG CCGTGGCCTG GGGCGTGTCC AAGAAGGTCA AGATTGCGCT GCGCGCCGAC AACCTCGTGC TGATGTACTT GGCCACCAAG ACCGAGTAG
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Protein sequence | MSGRKSLLIA AAAILVGLAG LPASAQTLRY ANQGTLKSLD PYTFKESTTI AHHAHVYEGL TARDKDLKII PALAESWETP EPTRWRFHLR KGVKFHNGEP FTADDVIFSA DRVRATGSNF LSNVPPDAKF VKIDDYTVDV KLDAPNPILI SQWDTWYIMS KKWCEENNSV APTPVSATTP SYAALHENGT GPFIIESHQP GVKTVFKVNP NWWRKPEHNI KEIVFTTISS DATRVAALLS GEVDIIEPVP VQDIGRVDSS PNAQVLKGPE LRTIFLGMDE SRDELLYSNV KGKNPFKDIR VREAFYKAID VELIKTRVMR GLSTPSALMI APELFPLSKE FTRPKYDPDG AKKLLTEAGY PDGFEVALDC PNDRYVNDAA ICQAVVGMLA RIGVKVNLNA QPKAQYFAKV LKPGGYNTSF FLLGWTPSSM DAHNVMHDIM GCREDPKDPT RGEANLGNYC NKEFDALTDK VLVETDAAKR NQLIKQAFEI GIKDYGYIPV HQQAVAWGVS KKVKIALRAD NLVLMYLATK TE
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