| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2848 |
|---|
| Symbol | |
|---|
| ID | 5150623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2953243 |
|---|
| End bp | 2954073 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640557728 |
|---|
| Product | ABC transporter permease protein |
|---|
| Protein accession | YP_001238882 |
|---|
| Protein GI | 148254297 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCG CCTGGCGCCA GCTCGTCAAG CGCAAGGGGG CCATGGTCGG GCTCGGCCTG
ATCGCAGCCT TCATCCTGCT CGCCGTAGCA GCGCCGCTGG TGGCGCCCTA CGATCCCCTC
AAGACGAGCT GGACGCTGGT CCGCAAGGCG CCGTCGGCGG CGCATTGGTT CGGCACCGAC
GATCTCGGCC GCGACGTCCT GGCCCGCGTC CTCTACGGCG CGCGCGCCTC GCTGCTCGCC
GGCGCCATCT CGGTCGTCAT CGCGCTGTCG ATCGGCGTGC CGATCGGCAT GATCGCAGGC
TACCGCGGCG GCTTCGTCGA CGCCCTGATC AGCCGCATCA CCGACGCGAT GCTGGCCTGC
CCGTTCCTGA TCCTGGCGAT CGCGCTGGCC GCGTTCCTCG GTCCGAGCCT CGGCAACGCC
ATGATCGCGA TCGGCATCTC CGCGACCCCG ATCTTCGTCC GACTGACCCG CGGCGAGGTG
CTGAACGTCA AGGTCGAGGA GTATGTCGAG GCCGCGCGCA GCGTCGGCGA CACCGACCTG
CAGATCGCGG TCAGGCACAT CCTGCCGAAC ATCATGCCGG CGCTCTTGGT GCAGGCGACC
TTGTCGGTCG CCGCCGCCAT CATCGCCGAG GCGGCGCTGT CGTTCCTCGG CCTCGGACAG
CAGCCGCCGG CGCCGTCCTG GGGCAGCATG CTCAACGCCG CCCAACGCTT CCTTACCAAC
GCGCCCTGGA TGGCGATCTG GCCGGGACTT GCGATCTTCC TCGTCGTGCT GTCGCTCAAC
CTGCTGGGTG ACGGCCTGCG CGACGCGCTC GACCCGCAGC AGGAGCAGTA G
|
|---|
| Protein sequence | MQRAWRQLVK RKGAMVGLGL IAAFILLAVA APLVAPYDPL KTSWTLVRKA PSAAHWFGTD
DLGRDVLARV LYGARASLLA GAISVVIALS IGVPIGMIAG YRGGFVDALI SRITDAMLAC
PFLILAIALA AFLGPSLGNA MIAIGISATP IFVRLTRGEV LNVKVEEYVE AARSVGDTDL
QIAVRHILPN IMPALLVQAT LSVAAAIIAE AALSFLGLGQ QPPAPSWGSM LNAAQRFLTN
APWMAIWPGL AIFLVVLSLN LLGDGLRDAL DPQQEQ
|
|---|
| |