Gene BBta_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2825 
Symbol 
ID5151669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2921417 
End bp2922370 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID640557706 
Producthypothetical protein 
Protein accessionYP_001238860 
Protein GI148254275 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACGT CCCTGCCACA GAAGCCGCCA GTGGCGCGCA AGCGTGCGCC CGCGCGCACG 
GACCGGCCGT TCCGCGGGAT TGCGCTGATC CTGCTGTCGA CCGTGTTCCT CGGCACCTCC
GACGTGACCG CCAAATATCT GTCGAAGACG CTGCCCGCGA TCGAAATCAC CTGGATCCGC
TTCACGGTGT TCGCGCTGAT CATGGTGCCG GCGATGATCC CGGGCTCGCC GCTGTTTGCG
ATGCGCACCG AGCGGCTGCC ATTCCAACTC CTGCGCGGCG TCGCTTTGCT CGGCTCGTCG
ATCTTCTTCA TCACCGGTCT CGGCTATCTG CCGATCGCGG AAGCCTCCGC CACCGGCTTC
GTCGCGCCGC TGTTCGTCAC GGCGCTCTCG ATCATCTTTC TCGGCGAGAA GGTCGGCCTG
CGCCGCTGGA TCGCGACCGC GGTCGGCCTG TGCGGCGTGC TGATCATCCT CCGGCCCGGC
ACCGGCGCGT TCCATCTCGC CGCTCTGTTC CCGATCGCCT CCGCCTTCTC CTGGGCCTGC
ACCCTGATCA TGACGCGGAT CATGAGCGGC CGCGAGCACG CCATCACCAT CATGACCTAT
TCGTCGATTG CCGGCCTGTG CCTGCTGTCG GCGATGGTGC CGTTCGTGTG GATCACGCCG
TCATGGCAGG ACATCGGCTT CGGCGTGCTG GTCGGCGTCG CCTCGACGAT GGGGCAGTGG
ATCGTTGTGC TCGCGTTCCG CTACGCCGAT GCCTCCGTGC TGGCGCCGTT CTCCTACACC
CAGCTGCTGT GGGTCAGCCT GCTCGGCTTC TTCGTGTTCG GCGAGGTGCC GAGCATCTGG
ACCGTGGTCG GCGCCGCCTT CATCGTCTCC AGCGGTCTCT ACACCGCCCA TCGCGAGCGC
GTGCGCCGCT CGCAATTGCT GCAGGTTGCC GGCGAGAGTT CGCCGAATCC CTGA
 
Protein sequence
MPTSLPQKPP VARKRAPART DRPFRGIALI LLSTVFLGTS DVTAKYLSKT LPAIEITWIR 
FTVFALIMVP AMIPGSPLFA MRTERLPFQL LRGVALLGSS IFFITGLGYL PIAEASATGF
VAPLFVTALS IIFLGEKVGL RRWIATAVGL CGVLIILRPG TGAFHLAALF PIASAFSWAC
TLIMTRIMSG REHAITIMTY SSIAGLCLLS AMVPFVWITP SWQDIGFGVL VGVASTMGQW
IVVLAFRYAD ASVLAPFSYT QLLWVSLLGF FVFGEVPSIW TVVGAAFIVS SGLYTAHRER
VRRSQLLQVA GESSPNP