| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2822 |
|---|
| Symbol | nasD |
|---|
| ID | 5151008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2916348 |
|---|
| End bp | 2917529 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557703 |
|---|
| Product | assimilatory nitrate reductase (NADH) beta subunit |
|---|
| Protein accession | YP_001238857 |
|---|
| Protein GI | 148254272 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTG CGAAGCTGGT CGAGGAGCTG TCGCAGACCG CCCTCGGTCG CTATGCGATC
GCCGTCATCG GCGAGGAGCC GCGGCTCGCC TACAACCGCG TGCTGCTGTC GTCGGTCTTG
GCCGGCGAGG CGGCATCGCA CGAGATCGAG CTCAAGCCCG CGGCGTGGTG GCGCGAGCGC
GGCGTGACGC TGAAATATGG CGCGCGGGTC ACGCGCATCG ATGTCGGCCG CCGGGAGTTG
GAGGTCGAGA ACGAAGAGAA CATGGCGTTC TCACGCCTGG TTCTGGCCAC CGGCTCGCTG
CCGCTGCGGC TGCCGGTGCC CGGCGCCGAT CTGGCGGGGG TGCATACGTT CCGCGACAGC
CGCGACACCG ACGTGCTGTT GAGCCTGGCT GCGAAGAAGT CGCGCGTGGT CGTGGTCGGC
GGTGGACTGC TCGGGCTGGA GGCGGCCTAT GGCCTGGCGC GTGCCGGCGC CAAGGTGACG
CTGCTGCACC TGATGGATCG GCTGATGGAG CGGCAGCTCG ACGCCTCGGC GGCGGCGCTG
TTGAAAGTGC TGGTCGAGCG GAAAGGCATT GAGGTTCTGC TGCAGGCGAG CACGGCGGCG
ATCCATGGCG AGCTCCGCGT CGAGCGTGTC GAACTCGCCG ACGGGCGGAG CCTGGCTGCG
GATGCGGTGA TCTTTGCGGC CGGCATCAGG CCCAACGTGG CGCTCGCCAA GGAGGCGGGG
CTTGCGGTCA ATCGCGGCAT CGTCGTCGAC GACGCTCTGC AGAGTTCGGT GCCCGGCATC
TCCGCGCTCG GCGAATGCGC CGAGCATCGC GGCACCTGCT ACGGGCTGGT CGAGCCCGCT
TATGAGCAGG CGCGGGTGCT GGCGCGGCAT CTCGCGGGCC GCAAGGCGGC CTATCAGGGC
AGCGTGGTCG CCACCAATCT GAAGGTGTCC GGGGTCGCGG TGTTCTCGGC CGGTGACTTC
GTCGGCGCCC CGGGCAGCGA GGCGATCGTG CTCAATGATG CCAGGCGCGG CATCTACAAG
AAGCTCGTGA TCGCCGATGG CCGCCTCACC GGTGCCGTGC TGATCGGCGA CACGCAGGAT
GCGCTCTGGT ATCGCGACCT GATCCGCAAT CGCGAGCCGA TTGCGTCGAT CCGGACCGAG
ATGATGTTCG GCCGCGCGGG GGCGCGGCCA AGGGCCGCGT GA
|
|---|
| Protein sequence | MAAAKLVEEL SQTALGRYAI AVIGEEPRLA YNRVLLSSVL AGEAASHEIE LKPAAWWRER
GVTLKYGARV TRIDVGRREL EVENEENMAF SRLVLATGSL PLRLPVPGAD LAGVHTFRDS
RDTDVLLSLA AKKSRVVVVG GGLLGLEAAY GLARAGAKVT LLHLMDRLME RQLDASAAAL
LKVLVERKGI EVLLQASTAA IHGELRVERV ELADGRSLAA DAVIFAAGIR PNVALAKEAG
LAVNRGIVVD DALQSSVPGI SALGECAEHR GTCYGLVEPA YEQARVLARH LAGRKAAYQG
SVVATNLKVS GVAVFSAGDF VGAPGSEAIV LNDARRGIYK KLVIADGRLT GAVLIGDTQD
ALWYRDLIRN REPIASIRTE MMFGRAGARP RAA
|
|---|
| |