Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2794 |
Symbol | ccoP |
ID | 5151119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2889349 |
End bp | 2890221 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640557679 |
Product | cytochrome-c oxidase fixP chain |
Protein accession | YP_001238833 |
Protein GI | 148254248 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.40028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.764362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC ATACCGAAGT CGACAGCGTC TCCGGCACCG CCACGACGGG CCACGCCTGG GACGGCATCA AGGAGCTCAA CACCCCGCTG CCGCGGTGGT GGGTGATCAC CTTCTACATC ACCATCATCT GGGCGATCGG CTACTGGATC GTGTATCCGG CCTGGCCGAC CATCTCCAGC AACACCAAGG GCCTGTTCGG CTACTCGTCC CGCGCGGACG TGGCGGTCGA GCTCGCCAAT CTCGAGAAGA TCCGCGGCGC CAAGATGGCG GCGCTGGCCA CTGCCTCGCT CGCCGACATC GAGAAGGACC CGCAGATGCT CGCCCTGGCG CGCGCCAAGG GCAAGACCGT GTTCGGCGAC AATTGCGCCG CCTGCCACGG CACGGGTGCG GCCGGCGCCA AGGGCTTCCC GAACCTGAAC GACGACGACT GGCTGTGGGG CGGCTCGCTG GAGCAGATCC AGCAGACCCT GCTGTACGGC GTGCGCTCGG GCCATCCGAA GACCCGTGAA GGCCAGATGC TCGCTTTCGG CAAGGACGGT GTCCTGAAGC CGGCGGAGAT CGTCACGGTC GCCAACTATG TCCGCGAGCT AGCGGGCCTG CCGACCCGGC AGGGCTACGA CGCCAAGGCG GGCGCCAAGA TCTTCGCCGA GAACTGCGTC GCCTGCCATG GCGACAATGC CAAGGGCAAT CCGGAGGTCG GCGCGCCGAA CCTCACGGAC AAGATCTGGC TCTATGGCTC GGACGAGGCG ACCCTGATCG AGACCATCAC CAATGGTCGC GCCGGCGTCA TGCCGGCCTG GGAAGGCCGG CTCGACCCGA CCACGATCAA GGCGATGGCG GTCTATGTCC ACTCGCTGGG TGGAGGAAAG TAA
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Protein sequence | MADHTEVDSV SGTATTGHAW DGIKELNTPL PRWWVITFYI TIIWAIGYWI VYPAWPTISS NTKGLFGYSS RADVAVELAN LEKIRGAKMA ALATASLADI EKDPQMLALA RAKGKTVFGD NCAACHGTGA AGAKGFPNLN DDDWLWGGSL EQIQQTLLYG VRSGHPKTRE GQMLAFGKDG VLKPAEIVTV ANYVRELAGL PTRQGYDAKA GAKIFAENCV ACHGDNAKGN PEVGAPNLTD KIWLYGSDEA TLIETITNGR AGVMPAWEGR LDPTTIKAMA VYVHSLGGGK
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