| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2695 |
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| Symbol | ligR |
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| ID | 5155644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2787195 |
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| End bp | 2788094 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640557587 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001238741 |
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| Protein GI | 148254156 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.311344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA AGCAGCTCGA ATATTTCGTG CAGGTGGCCG AGCTCGGCTC GTTCAGCAAG
GCGGCGAGCG TGCTCGACGT GGCACAGCCG GCGCTGTCGC GGCAGGTGCG GGCGCTGGAA
TCGGAGCTGA AGCAGCAGCT GTTCGCGCGC AATGGCCGCG GGGTCGAACT GACCGAAGCG
GGAAAGCGGC TGCTCGATCA CAGCGTCGGC GTGCTGCAGC TGGTGGCGCA TGCACGCGAG
GATCTCGGCG CCAGCCGTGA TGCGCCGGTC GGCCGCGTCA CCATCGGCCT GCCGCCGAGC
ATCGCGCGGC AATTGACGCT GCCGCTGATC GACCGCTTCC GGAAAGAGTA TCCGGCGGCG
CGACTGGCCG TCGTCGAAGG ATTGTCGACG CATGTGGTGG AGTGGGTCAC CACCGGACGC
ATCGATGTCG GCATGGTCTA CAATCCCGAG GCCCAGGCCG GCATCGAGAT CACGCCGGTG
CTGCAGGAGC CGCTCGCGCT GGTGAGCCAT GCGCCCAAGG GCAAGCGCCG CACCACCGCG
CCGCTGCCGA TGGCCGAGCT GCCGCGCTAC AGCCTGATCA TGCCCGAGCG CGTGCATGCG
ATGCGCAGAT TGCTGGAGAC CCAGGCTGCG CTGGCCGGGA TCAAGCTCGA CATCGCCTGG
GAGGTGTCGA GCGTGCCCTC GATCATCGAC CTCGTCTGCG CCGGCTACGG CCACGCCGTG
CTGACGCCGA GCGGCGTCGC CGCCTCGGGC CGCGCCAGCG AGCTCGCCAT TCGCCCCCTG
ACCGAGCCCG CCCCGACCAG CGTGCTGTGC TTCGTCACCT CGGCGCACAA GCGGCCGACG
CCGCTGGCGC AGCAGACGAT CAAGCTGGCG ACCGCGCTGA TCAGGAAGCT GCCGCGCTGA
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| Protein sequence | MNLKQLEYFV QVAELGSFSK AASVLDVAQP ALSRQVRALE SELKQQLFAR NGRGVELTEA
GKRLLDHSVG VLQLVAHARE DLGASRDAPV GRVTIGLPPS IARQLTLPLI DRFRKEYPAA
RLAVVEGLST HVVEWVTTGR IDVGMVYNPE AQAGIEITPV LQEPLALVSH APKGKRRTTA
PLPMAELPRY SLIMPERVHA MRRLLETQAA LAGIKLDIAW EVSSVPSIID LVCAGYGHAV
LTPSGVAASG RASELAIRPL TEPAPTSVLC FVTSAHKRPT PLAQQTIKLA TALIRKLPR
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