| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2463 |
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| Symbol | pdxH |
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| ID | 5152098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2550715 |
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| End bp | 2551365 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640557379 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001238534 |
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| Protein GI | 148253949 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACC CCACCAGCAT CAAACACCAG ACAACCTTAA CATCCGGTAC ATCGGCCGAT
TTTACCCAGG CCAGCGAACC GTTTGCCCTG TTTGCCGAGT GGTTCAGCGA GGCCAACAAA
AGCGAGCTGA ACGATCCGAA TGCGATGGCA CTGGCGACGG TCGACGACAG CGGGCTGCCC
GATGTGCGCA TGGTGCTGAT GAAGGGCTAT GACGAGGACG GCTTCGTGTT CTACAGCCAC
AAGGCCAGCC AGAAGGGCCA GGAGCTCGCC GGCAATCCGA AGGCCGCGCT GCTGTTTCAC
TGGAAGTCGC TGCGCCGGCA GGTCCGCATC CGCGGCCTGG TGACGCCGGT GACCGACGAA
GAGGCCGACG CCTATTTCGC GACTAGGCCG AAGCAGGCGC AGCTCGGTGC CTGGGCCAGC
AAACAGTCGC AGCCGCTGGA AAGCCGATTC GCCTTCGAGC AGGCGATCGC CAAGGTCGCT
GCGCAATACA TCATCGGCGA AGTGCCGCGG CCGCCGGGGT GGAGCGGCTG GCGCATCACC
CCGGTGCGGA TGGAGTTCTG GCACGACCGG CCATTCCGTC TGCACGACCG CATCGAATTC
CGGCGCGACG CGGCCGGCCA GCCGTGGACA AAGGTGAGGA TGTATCCGTA G
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| Protein sequence | MTDPTSIKHQ TTLTSGTSAD FTQASEPFAL FAEWFSEANK SELNDPNAMA LATVDDSGLP
DVRMVLMKGY DEDGFVFYSH KASQKGQELA GNPKAALLFH WKSLRRQVRI RGLVTPVTDE
EADAYFATRP KQAQLGAWAS KQSQPLESRF AFEQAIAKVA AQYIIGEVPR PPGWSGWRIT
PVRMEFWHDR PFRLHDRIEF RRDAAGQPWT KVRMYP
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