Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2455 |
Symbol | alkK |
ID | 5152195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2543801 |
End bp | 2545429 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640557373 |
Product | putative acyl-CoA synthetase |
Protein accession | YP_001238528 |
Protein GI | 148253943 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.680464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGGTT TGATGCAAGA CTGGCCCCTG CTTTGTCACC GGATCATCGA ACATGCGGCG ACAATCCACG GCTCCCAGGA GGTCGTGACA CGCTCTGTCG AAGGTCCCAT CGTTCGCACC ACCTACGGCG AGATCCACAA ACGCGCCCTC AAGGTTTCAC AGCAGTTGAC GCGTCATGGC ATCAAGCTGG GGGATCGTGT TGCCACCATT GCCTGGAATA CCGGCCGCCA TCTCGAGGTC TGGTACGGCA TCATGGGAAT CGGCGCGATC TGCCACACCG TCAATCCAAG GCTGTTTCCG GAGCAGATCG CCTGGATCAT CAACCACGCC CAGGACCGGG TCGTTATCAC CGACCTGACC TTCGTGCCGC TGCTGGAGAA GCTCGCCGAC AAGCTGCCCA GCGTCGAGCG CTACGTGGTG CTGACCGATG CAGCGCACAT GCCGCAGACG ACGCTGAAGA ACGCGGTCGC CTATGAATCC TGGATCGGCG AGGCCGATGG CGACTTCGCC TGGGGCACGT TCGACGAGAA CACCGCGGCG GCGATGTGCT ACACGTCCGG CACCACGGGT GATCCGAAGG GTGTGCTGTA TTCGCATCGC TCCAACGTGC TGCATGCGTT GATGGCCAAT TCCAGGGATT CGCTCGGCAC CTCGGCCGCA GACACAATGC TTCCGGTGGT TCCGCTGTTC CATGCCAACA GCTGGGGCAT CGCATTCTCC GCGCCGTCGA TGGGCACCAA GCTGGTGATG CCCGGTCCGA AGCTCGACGG CGCGTCCGTC TACGAGCTGC TCGATACCGA GAAGGTGACC TACACCGCGG GCGTGCCGAC GGTGTGGCTC ATGCTGCTGC AGCACATGCA GGCGCATAAC CTCAAACTGC CCCATTTGAA GATGGTGGTG TGCGGCGGCT CGGCGATGCC GCGCTCGATG ATCCAGGCCT TCCTCGACAT GGGCATCGGC GTGCGCCACG CCTGGGGCAT GACCGAGATG AGCCCGATCG GCACGCTCGC GACCTTGAAG CCGCCGTTCC TCGACGCCGA GGGTGACGCC AAGCTCGACG TGCTGCAGAC CCAGGGCTTT CCGCCGTTCG GCGTCGAGAT GAAGATCACC GACGATGCCG GCAACAAGCT GCCCTGGGAC GGCAAGACCT TCGGCCGGCT GAAGGTCTCC GGGCCCGCCG TCTCCAAGGC CTACTACAAG GTCGACACCA ACATCCTCGA CGGCGAAGGC TTCTTCGACA CCGGCGACGT CGCGACGGTC GACCCCCACG GCTTCATGCG CATCACCGAT CGCTCCAAGG ACGTCATCAA ATCCGGCGGC GAATGGATCT CCTCGATCGA TCTGGAGAAC CTCGCGGTCG GCCATCCGGC CGTCGCAGAG GCGGCCGTGA TCGGCGTGTA TCACCCGAAA TGGGACGAGC GGCCGCTGCT CATCGTACAG CTCAAGCAGG GCCAGACCGC GACGCGCGAG GACATCCTGA AATACATGGA AGGCAAGATC GCCAAATGGT GGATGCCTGA TGACGTCGCG TTCGTGGACG GCATCCCGCA CACCGCAACC GGCAAGATCC TGAAGACGGC CTTGCGCGAC CAGTTCAAGG CCTATCGCTT CCCCAACGCG GCCGCTTGA
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Protein sequence | MLGLMQDWPL LCHRIIEHAA TIHGSQEVVT RSVEGPIVRT TYGEIHKRAL KVSQQLTRHG IKLGDRVATI AWNTGRHLEV WYGIMGIGAI CHTVNPRLFP EQIAWIINHA QDRVVITDLT FVPLLEKLAD KLPSVERYVV LTDAAHMPQT TLKNAVAYES WIGEADGDFA WGTFDENTAA AMCYTSGTTG DPKGVLYSHR SNVLHALMAN SRDSLGTSAA DTMLPVVPLF HANSWGIAFS APSMGTKLVM PGPKLDGASV YELLDTEKVT YTAGVPTVWL MLLQHMQAHN LKLPHLKMVV CGGSAMPRSM IQAFLDMGIG VRHAWGMTEM SPIGTLATLK PPFLDAEGDA KLDVLQTQGF PPFGVEMKIT DDAGNKLPWD GKTFGRLKVS GPAVSKAYYK VDTNILDGEG FFDTGDVATV DPHGFMRITD RSKDVIKSGG EWISSIDLEN LAVGHPAVAE AAVIGVYHPK WDERPLLIVQ LKQGQTATRE DILKYMEGKI AKWWMPDDVA FVDGIPHTAT GKILKTALRD QFKAYRFPNA AA
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