Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2273 |
Symbol | |
ID | 5150232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2356572 |
End bp | 2357207 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557201 |
Product | putative NUDIX hydrolase |
Protein accession | YP_001238357 |
Protein GI | 148253772 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.20194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.495948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCGG TCGAGTTCTT TGCGCGTGGC CGGGAGCGGT TGCGCTTCGA CGTTCCAAAA GCTCTGCTCG ATCCGGACGT CATTCCGACC AGCGGCGATT CCGGCACCGA TCGCATGCTC GAAATCATCG CCCGCGAGCA GCCGATCCGG CCCGCAGCCG TGCTGATCCC CGTGGTCGAT CATCCCGAGC CTACCGTGCT CTTGACCCAG CGCTCGCCGA ATCTCAGCAG CCATGCCGGC CAGATCGCGT TTCCGGGCGG CAAGATCGAC GTCACCGACG CCTCGCCGCT CGACGCGGCC TTGCGCGAGG CGGAGGAGGA GGTCGGGCTC GACCGCAGCT TCGTCGACCC GATCGGCTAT CTCGACGTCT ACGGCACCGC GTTCGGCTTC CGCATCCTGC CGACCGTGGC CCGCGTACGG CCCGGATTTA CGCTCAAAAT CAACGAAGGC GAGGTCGACG ATGCGTTCGA AGTGCCGCTG GCCTTCCTGA TGGACCCCAC CAATCATCAG CTGCATTCCA AGGAATTTCG TGGCATGGAG CGCTCGTACT ACGCGATGCC GTTTGCGGAG CGCTACATTT GGGGGGCGAC GGCGGGGATC CTGCGCGTGC TCTACGAACG GATTTATCTG CCATGA
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Protein sequence | MNSVEFFARG RERLRFDVPK ALLDPDVIPT SGDSGTDRML EIIAREQPIR PAAVLIPVVD HPEPTVLLTQ RSPNLSSHAG QIAFPGGKID VTDASPLDAA LREAEEEVGL DRSFVDPIGY LDVYGTAFGF RILPTVARVR PGFTLKINEG EVDDAFEVPL AFLMDPTNHQ LHSKEFRGME RSYYAMPFAE RYIWGATAGI LRVLYERIYL P
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