Gene BBta_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2273 
Symbol 
ID5150232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2356572 
End bp2357207 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content64% 
IMG OID640557201 
Productputative NUDIX hydrolase 
Protein accessionYP_001238357 
Protein GI148253772 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.20194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.495948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCGG TCGAGTTCTT TGCGCGTGGC CGGGAGCGGT TGCGCTTCGA CGTTCCAAAA 
GCTCTGCTCG ATCCGGACGT CATTCCGACC AGCGGCGATT CCGGCACCGA TCGCATGCTC
GAAATCATCG CCCGCGAGCA GCCGATCCGG CCCGCAGCCG TGCTGATCCC CGTGGTCGAT
CATCCCGAGC CTACCGTGCT CTTGACCCAG CGCTCGCCGA ATCTCAGCAG CCATGCCGGC
CAGATCGCGT TTCCGGGCGG CAAGATCGAC GTCACCGACG CCTCGCCGCT CGACGCGGCC
TTGCGCGAGG CGGAGGAGGA GGTCGGGCTC GACCGCAGCT TCGTCGACCC GATCGGCTAT
CTCGACGTCT ACGGCACCGC GTTCGGCTTC CGCATCCTGC CGACCGTGGC CCGCGTACGG
CCCGGATTTA CGCTCAAAAT CAACGAAGGC GAGGTCGACG ATGCGTTCGA AGTGCCGCTG
GCCTTCCTGA TGGACCCCAC CAATCATCAG CTGCATTCCA AGGAATTTCG TGGCATGGAG
CGCTCGTACT ACGCGATGCC GTTTGCGGAG CGCTACATTT GGGGGGCGAC GGCGGGGATC
CTGCGCGTGC TCTACGAACG GATTTATCTG CCATGA
 
Protein sequence
MNSVEFFARG RERLRFDVPK ALLDPDVIPT SGDSGTDRML EIIAREQPIR PAAVLIPVVD 
HPEPTVLLTQ RSPNLSSHAG QIAFPGGKID VTDASPLDAA LREAEEEVGL DRSFVDPIGY
LDVYGTAFGF RILPTVARVR PGFTLKINEG EVDDAFEVPL AFLMDPTNHQ LHSKEFRGME
RSYYAMPFAE RYIWGATAGI LRVLYERIYL P