| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2229 |
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| Symbol | exbD |
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| ID | 5150202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2305339 |
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| End bp | 2305764 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557158 |
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| Product | inner membrane protein |
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| Protein accession | YP_001238314 |
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| Protein GI | 148253729 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.243191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.205918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTCA AGCTCGCCAA GCGTCCTGAT GAGTTCGAGG AGACGCACGA CATCAATGTG
ACGCCGTTCA TCGACGTCAT GCTGGTGCTG CTCATCATCT TTATGGTGGC CGCGCCGCTG
GCGACCGTCG ATATCCCGGT CAACCTGCCG GCGATCTCGG CGGAGCCGCA GCCGCGCGCG
GAGACGCCGG TTTTCGTGAC CTTCAAGGCC GACCGTTCGC TTGCGGTCGG CGATCAAAGC
GTGGCGCAGG CCGACATCGC CGCCTCGCTC GATGCCGCGA CGAAGTCCGA CCATGGCCAG
CGGGTGCTGC TGCGCGCCGA CCAGACGCTG CCCTATGGCG AGGTGATGGC GCTGATGAAC
ACGCTGCGGC GCGCCGGCTA CACCAAGGTG GCGCTGGTCG CATTGGAAGA CCGGAGCGTG
CCGTGA
|
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| Protein sequence | MAVKLAKRPD EFEETHDINV TPFIDVMLVL LIIFMVAAPL ATVDIPVNLP AISAEPQPRA
ETPVFVTFKA DRSLAVGDQS VAQADIAASL DAATKSDHGQ RVLLRADQTL PYGEVMALMN
TLRRAGYTKV ALVALEDRSV P
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