Gene BBta_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2128 
Symbol 
ID5154602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2205206 
End bp2206756 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content67% 
IMG OID640557065 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001238221 
Protein GI148253636 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA GTTCAGCTCC ACCGGCAGCG CGGCCCTCTC TTCTGGAGAT CCGTGGCCTG 
ACCAAGAGCT TCGGTGCGCT GAAGGCGCTG CAGGATGTCG ACTTCACGCT CGGTGAGGGC
GAGATCCATG CGCTGCTCGG CGAGAATGGT GCCGGCAAGT CGACCTTGAT CAAGGTCGTC
ACCGGCGTGT TCGCGCGCGA TGCAGGAACT GTCCGTCTCG CCGGCGATGA GATCGCGCCG
CGCTCCGCCA AGGATGCCGT CGAGGCCGGC ATCGCCACCG TCTATCAGGA AGTGAACCTG
CTGCCGAACC TCTCGGTGGC GCAGAATCTC TATCTCGGCC GGCAGCCGAC GCGCTTCGGC
GTCGTGCGGC AGGCCGAGAT GCGGCGGCGC GCGCATGCGC TGCTGCTCGA TTACGGCCTG
GATATCGATG TCGGCGCGCC CTTGGCGAGC TATTCGGTGG CGGTCCAGCA CATCACGGCG
ATCGCGCGCG CGGTCGATCT GTCGGCGCGC GTCCTCATTC TCGACGAGCC GACTGCGAGC
CTCGATCGCC ACGAGGTCGA AATTCTTTTC AGGGTAATGC GAAAGCTCGC AGCTGATGGC
ATCGGCATCG TCTTCGTCAG CCATTTCCTC GATCAGGTCT ACGAGATCTG CGATCGTGTC
ACCGTGCTGC GCAATGGCCG CCTGATCGGC ACCCGCGACA TCACCGATCT GCCGCGGCTC
GACCTCATCC GCATGATGCT GGGGCGGGAA TTGGCCGAGA CCACCCACGA ACGCGCCGCG
AGCCAGCCCG ACACGGCGCG CGAGGTCTGC GTCAGCTTCA AAGGCTTTGG CAAGCAGGGC
TATGTGGCGC CGTTCGACCT GGAGCTTCGC CGCGGCGAGG TGGTCGGGCT GGCCGGCCTG
CTCGGCTCGG GACGAACCGA AACGGCAAGG CTCGTGTTCG GGGCCGAGCG CGCCGACAGC
GGCGAAGCCA GTGTTGCGGG CAAGGCTGTC AGGCTGAACT CGCCGCGCGA CGCCGCAGGC
CTCGGCTTCG GCTATTGCCC GGAGGAGCGC AAGACCGAGG GCATCGTTGC CGATCTCACC
GTCCGCGAGA ACATTGTGCT GGCGCTGCAG GCCCGGCGCG GCCTGCACCG TCCGCTGTCG
CGGCGTGAGC AGGACGAGAT CGCGATGCGC TACATCCGCA TGCTCGACAT CAGGCCGCCT
GATCCGGAGC GTCCGATCGG GCTGCTGTCG GGCGGCAATC AGCAGAAGGC GCTATTGGCG
CGCTGGCTCG CCACCTCGCC GAAGCTGCTG GTGCTCGATG AGCCGACCCG CGGCATCGAT
GTCGGCGCCC ACGCCGAGAT TATCCGCCTC GTCCGCGACT TGTGCGAGCA GGGGCTGGCG
CTGCTGGTGA TTTCGTCCGA GCTCGACGAG ATCGTCACTT ATTCCAACCG CGTTGTCGTG
CTGCGCGACC GCGCCCATGT CGAGGAGCTG AAGGGCGACG CTGTCGAGGT CTCCAGCATC
CTCGCGGCGA TCGCGGCCGA TGCGCCGACC GCGCAGGAGG TCGCATCATG A
 
Protein sequence
MSDSSAPPAA RPSLLEIRGL TKSFGALKAL QDVDFTLGEG EIHALLGENG AGKSTLIKVV 
TGVFARDAGT VRLAGDEIAP RSAKDAVEAG IATVYQEVNL LPNLSVAQNL YLGRQPTRFG
VVRQAEMRRR AHALLLDYGL DIDVGAPLAS YSVAVQHITA IARAVDLSAR VLILDEPTAS
LDRHEVEILF RVMRKLAADG IGIVFVSHFL DQVYEICDRV TVLRNGRLIG TRDITDLPRL
DLIRMMLGRE LAETTHERAA SQPDTAREVC VSFKGFGKQG YVAPFDLELR RGEVVGLAGL
LGSGRTETAR LVFGAERADS GEASVAGKAV RLNSPRDAAG LGFGYCPEER KTEGIVADLT
VRENIVLALQ ARRGLHRPLS RREQDEIAMR YIRMLDIRPP DPERPIGLLS GGNQQKALLA
RWLATSPKLL VLDEPTRGID VGAHAEIIRL VRDLCEQGLA LLVISSELDE IVTYSNRVVV
LRDRAHVEEL KGDAVEVSSI LAAIAADAPT AQEVAS