Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2054 |
Symbol | dppB |
ID | 5152854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2125303 |
End bp | 2126313 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640556992 |
Product | peptide ABC transporter permease |
Protein accession | YP_001238148 |
Protein GI | 148253563 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0359637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.365039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGAT TCGCGCTGAC CAGATTGAGC CTCGTGGTTC CGACGTTCAT CGGAATCACC TTGCTCGTGT TCGTGTTGAT CCGTCTGATC CCCGGGGATC CGATCGAGAC CATGGCCGGC GAGCGCGGCA TCGATCCCGC CCGCCTCGCG CAGCTTCGCA AAGATTACGG CTTCGATCAG CCGGTGCTGG TCCAATATGG ATTCTATTTG TCGCGGCTGG TGCATGGCGA CTTCGGCCGC TCGATCGTCA CGCATGAGCC GGTCATCGCC GAATTCCAGA GCCTGTTTCC GGCCACGGTC GAATTGTCGA TCTGCGCCAT CCTGTTTGCG CTCTGTATCG GGCTGCCGGC CGGCATTATC GCGGCGGTGC GGCGCAACTC GATCTTCGAT CACGGCGTGA TGGGGATCTC GCTCACCGGC TATTCGATGC CGATCTTCTG GTGGGGATTG CTGCTGATCC TGCTGTTCTC GGTACAGCTT GGGTGGACGC CGGTGTCGGG CCGGATCGCA GTGCAGTACT TCATCGAGCC GGTCACAGGC TTTCTGCTGG TCGATACGCT GCTTGCCGGC GACGTCGGCG CGTTCCGGTC CGCCCTGTCG CATCTCGTGC TGCCGACGAT CGTGCTCGGC ACCGTGCCGC TTGCAGTGAT CGCGCGCATG ACGCGCTCGG CGATGCTGGA GGTTCTGGGC GAGGATTACA TCCGCACCGC CCGCGCCAAG GGCCTGCCGC GCTTCCGCGT GATCGCGATC CATGCCTTAC GCAATGCCCT GATCCCGGTG GTGACGGTGA TCGGCCTGCA GGTCGGCGTG CTGTTCACCG GGGCCATCCT CACCGAGACG ATCTTTTCCT GGCCGGGCGT CGGCAAATGG CTGATCGAGG GCATCAACCG CCGGGACTAT CCCGTGTTGC AGGGCGGCAC GTTGATGATT GGCGCGGTCG TCATGACTGT CAATCTCCTG GTTGATCTCG CCTATGGGCT GATCAATCCG CGCATCCGGT ACACGCGATG A
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Protein sequence | MLRFALTRLS LVVPTFIGIT LLVFVLIRLI PGDPIETMAG ERGIDPARLA QLRKDYGFDQ PVLVQYGFYL SRLVHGDFGR SIVTHEPVIA EFQSLFPATV ELSICAILFA LCIGLPAGII AAVRRNSIFD HGVMGISLTG YSMPIFWWGL LLILLFSVQL GWTPVSGRIA VQYFIEPVTG FLLVDTLLAG DVGAFRSALS HLVLPTIVLG TVPLAVIARM TRSAMLEVLG EDYIRTARAK GLPRFRVIAI HALRNALIPV VTVIGLQVGV LFTGAILTET IFSWPGVGKW LIEGINRRDY PVLQGGTLMI GAVVMTVNLL VDLAYGLINP RIRYTR
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