Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2043 |
Symbol | |
ID | 5153288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2112334 |
End bp | 2112972 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640556981 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001238137 |
Protein GI | 148253552 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.632575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGCGGA AGGATGTAAC GAAACCGGAG CCTTCGACGC GGACCGCGGC CCGCGCGCCC CGCCAGGCGC GAGGGCGTGA GCGCCGCGAA CAGCTCCTTG ATGCGGCGGC AGCGCTTATC GCCGAGTCCG GCCTCGCTGC GGTCAGCATG CATGCCGCGG CCCAGCGGGC AGGTGCCTCG ATTGGCTCCG CGTATCACTT CTTCCGCGAC AAGGACCAGA TGCTCGATGC GCTGGCGGAG CGGCACGATG CCGAGCTGCG GTCGGCATTC GATCGTGTGC TGCAGAGAAC CGATGCGGAG TGGGCGGCGC TGTCGCCAGC CGAGATCATC GAACAGCTGA TCGGCTGGGC GATCCGCTAC TTCGTCCGTC ATCCTGATGC GCTGGCGACG CTCGATCTGC ATGACAAGGC CATGCATGGC GAATTCAAGG CGGTCATCGA CCGGATCCTG CGTGCCAGGC TCGGTGAGGA GCTGGGGCCG CCGGCGGCCA CAACCATCGA CGCGGTCATG CTCGGCACCT TGCTGTTCAC GCGCGAGCAG GACCCAAGCA GCCGCGATCT CGTGGTCGCC GTGCTGCCAG ACATGTTGGC GTCCTATCTG ATCGCGCTGG AGTCGAAAGC GAAGCGAATG AAACGGTGA
|
Protein sequence | MRRKDVTKPE PSTRTAARAP RQARGRERRE QLLDAAAALI AESGLAAVSM HAAAQRAGAS IGSAYHFFRD KDQMLDALAE RHDAELRSAF DRVLQRTDAE WAALSPAEII EQLIGWAIRY FVRHPDALAT LDLHDKAMHG EFKAVIDRIL RARLGEELGP PAATTIDAVM LGTLLFTREQ DPSSRDLVVA VLPDMLASYL IALESKAKRM KR
|
| |