Gene BBta_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2043 
Symbol 
ID5153288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2112334 
End bp2112972 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID640556981 
ProductTetR family transcriptional regulator 
Protein accessionYP_001238137 
Protein GI148253552 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.632575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGGA AGGATGTAAC GAAACCGGAG CCTTCGACGC GGACCGCGGC CCGCGCGCCC 
CGCCAGGCGC GAGGGCGTGA GCGCCGCGAA CAGCTCCTTG ATGCGGCGGC AGCGCTTATC
GCCGAGTCCG GCCTCGCTGC GGTCAGCATG CATGCCGCGG CCCAGCGGGC AGGTGCCTCG
ATTGGCTCCG CGTATCACTT CTTCCGCGAC AAGGACCAGA TGCTCGATGC GCTGGCGGAG
CGGCACGATG CCGAGCTGCG GTCGGCATTC GATCGTGTGC TGCAGAGAAC CGATGCGGAG
TGGGCGGCGC TGTCGCCAGC CGAGATCATC GAACAGCTGA TCGGCTGGGC GATCCGCTAC
TTCGTCCGTC ATCCTGATGC GCTGGCGACG CTCGATCTGC ATGACAAGGC CATGCATGGC
GAATTCAAGG CGGTCATCGA CCGGATCCTG CGTGCCAGGC TCGGTGAGGA GCTGGGGCCG
CCGGCGGCCA CAACCATCGA CGCGGTCATG CTCGGCACCT TGCTGTTCAC GCGCGAGCAG
GACCCAAGCA GCCGCGATCT CGTGGTCGCC GTGCTGCCAG ACATGTTGGC GTCCTATCTG
ATCGCGCTGG AGTCGAAAGC GAAGCGAATG AAACGGTGA
 
Protein sequence
MRRKDVTKPE PSTRTAARAP RQARGRERRE QLLDAAAALI AESGLAAVSM HAAAQRAGAS 
IGSAYHFFRD KDQMLDALAE RHDAELRSAF DRVLQRTDAE WAALSPAEII EQLIGWAIRY
FVRHPDALAT LDLHDKAMHG EFKAVIDRIL RARLGEELGP PAATTIDAVM LGTLLFTREQ
DPSSRDLVVA VLPDMLASYL IALESKAKRM KR