Gene BBta_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2015 
Symbol 
ID5152965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2080745 
End bp2081464 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID640556956 
ProductGntR family transcriptional regulator 
Protein accessionYP_001238112 
Protein GI148253527 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG TACCTCCTGC CCCCTCCCTG GTTGACCAAG TCGTCGAAGC GATCACCGAC 
GAGATCGTCA GTGGCGTGCT CACATCCGGC TCACGGTTGA TCCAAGACGA TCTGGCGCAG
GCTTACGGCG TGTCGCGCCA GCCGGTGCAA CAGGCGCTGA TGCTGTTGCG GGGATGCGGG
CTGGTGCAGA GCGCGCCGGG CCGCGGCCTG ATCGTGGCGC CGCTCGACCC GAGCTCGGTC
CGCGATCTCT ATGAGATGCG GGCCGTCCTT GAAGGTCTTG CCGCGCGGCT CGCCGCTGAG
CGCGCCAGCC ATCGCGCCGC CAGCGAAGGG CCGGCCTATC TCGCGGCCGG GCACGAGGCC
GTGCGGAGCG GTCTGGTCAG CCGCAAGATC GAGACCGATA TCGCCTTCCA TCGCTTCCTG
AGCGAGCTCT CCGGCAACAC CCTCATCAAC GAGACCATGG CACCGCATTG GCCCTATCTG
AAGCGCGTGA TGTCCGACGT GCTGCAGAAG GAAGTCGGGA TGTCGCAGAC GGTCTGGGAC
GAACATGAGG AGATTCTTGC TGCCGTGATC GAGGGCCGCA GCAACGACGC CGAACGCCTG
AGCCGCGAGC ACATCACCCG GGCGGCGCGC GTGTTCGTGC ATCACCTCGA GGCTCAACAG
GACAGCAAGC CGAAGCAGCG GCGTACGCTC GCTGCGCGAA AAGTGTCGCT AGAATCATGA
 
Protein sequence
MRIVPPAPSL VDQVVEAITD EIVSGVLTSG SRLIQDDLAQ AYGVSRQPVQ QALMLLRGCG 
LVQSAPGRGL IVAPLDPSSV RDLYEMRAVL EGLAARLAAE RASHRAASEG PAYLAAGHEA
VRSGLVSRKI ETDIAFHRFL SELSGNTLIN ETMAPHWPYL KRVMSDVLQK EVGMSQTVWD
EHEEILAAVI EGRSNDAERL SREHITRAAR VFVHHLEAQQ DSKPKQRRTL AARKVSLES