| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2007 |
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| Symbol | hypB |
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| ID | 5150436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2071544 |
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| End bp | 2072509 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640556948 |
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| Product | hydrogenase nickel incorporation |
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| Protein accession | YP_001238104 |
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| Protein GI | 148253519 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.300196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTACTG TCTGTGGGTG CGGCGACGGC AAATCCTCGA TCGAAGCGGG TGATCATCAT
CATGATCACG ACGGTGACCA TCATCACGAT CATGGCCATG ATCATGCTGG TCATCATCAC
CATCACGGTC ATCATCATCA TGGTCATGAC CACGATGATC ACGATCATCA TCACGCGCAT
GACCATGACC ATGATCATGA CCACCATCAT GATCATGGCC CTGCCGACCG CATCGATTGT
TCGGCAAACC CCGCCGGTCA GGAGATTGCC GGCCTGTCCA GCGGCCGCAT CATCCAGATC
GAGCGCGACA TTCTCGGCAA GAACGACCGC CTCGCGGCGG AAAACCGCGC GCGCTTCGCC
GCGCATGACG TGCTGGCGTT CAACGTCGTC TCCAGCCCTG GCGCGGGCAA GACCTCACTG
CTGGTCCGCG CCGTCTCCGA TTTGAAGCCG AGCCGTCCCG TCGCGGTGAT CGAGGGCGAT
CAGCAGACGT CGAATGATGC CGAGCGCATT CGCGCCACCG GCGTGCCAGC GATCCAGATC
AATACCGGCA AGGGTTGTCA TCTCGATGCG GCGATGGTCG GCGAAGCCTA TCGCCGCTTG
CCGTCAATGC GCGGCGGGCT CCTGTTCATC GAGAATGTCG GAAATCTCGT CTGCCCGGCC
GCCTTCGATC TCGGCGAAGC CTGCAAGATC GTCGTATTCT CGACCACTGA GGGCGAGGAC
AAACCGCTCA AATACCCGGA CATGTTCGCC GCCTCGGCGC TGATGCTGAT CAACAAGATC
GACCTGGCGC CGGTGCTCGA TTTCGACCTG GCACAGACCA TCGAATATGC CCGACGGGTC
AATCCCAGGA TCGAGGTGCT GACGATCTCG GCCAAGACCG GAGAGGGCGT CTCGGCGTTC
TACGCCTGGA TCAGGAAGCA GACAGACCGG ATGCGGGCCG GCACGCTCGG GACCGTTCAG
GGATGA
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| Protein sequence | MCTVCGCGDG KSSIEAGDHH HDHDGDHHHD HGHDHAGHHH HHGHHHHGHD HDDHDHHHAH
DHDHDHDHHH DHGPADRIDC SANPAGQEIA GLSSGRIIQI ERDILGKNDR LAAENRARFA
AHDVLAFNVV SSPGAGKTSL LVRAVSDLKP SRPVAVIEGD QQTSNDAERI RATGVPAIQI
NTGKGCHLDA AMVGEAYRRL PSMRGGLLFI ENVGNLVCPA AFDLGEACKI VVFSTTEGED
KPLKYPDMFA ASALMLINKI DLAPVLDFDL AQTIEYARRV NPRIEVLTIS AKTGEGVSAF
YAWIRKQTDR MRAGTLGTVQ G
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