Gene BBta_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1999 
SymbolhupD 
ID5152110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2066944 
End bp2067531 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID640556940 
Producthydrogenase maturation 
Protein accessionYP_001238096 
Protein GI148253511 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACC ACGCGAAGCT CGATCGCATC CTGGTGCTCG GCATCGGCAA TATCCTGTGG 
GCGGATGAAG GCTTCGGCGT GCGGGTGGTG GAGGAATTCC ACCGCCGCTA CGCCGTGCCC
GACAACGTCA CGATCCTCGA TGGCGGCACC CAGGGACTCT ATCTGGTCAA CTATGTCGAG
GAGGCGGACG GCCTGATCGT GTTCGACGCG ATCGACTATG GACTTGCGCC GGGCGAGCTC
AAGCTCGTCC GCGACGACGA GGTGCCGCGC TTCACCGGTG CCAAGAAGAT GAGCCTGCAC
CAGACCGGGT TCCAGGAGGT CCTGAGCGCA GCCGATCTGC TCGGCCGCTA TCCGCGCCGG
CTCGCCTTGA TCGGCTGCCA GCCGCTCGAT CTCGAGGATT GGGGCGGCCC ATTGACGGCG
CCGGTGCGCG CGCAGATCGG GCCGGCGATC GAACTGGCCT GCGCGCTCCT GGCAGAATGG
GGCGCGCCAG CCGCGCTGCG AAGCGAGCCG GTCGCGGCCG ATGCGCGGCT GCTCGCCAAT
GACATCGATC ACCAGAGCTA CGAGATGCGC GCCCGTCCGG CAGAGTGA
 
Protein sequence
MTDHAKLDRI LVLGIGNILW ADEGFGVRVV EEFHRRYAVP DNVTILDGGT QGLYLVNYVE 
EADGLIVFDA IDYGLAPGEL KLVRDDEVPR FTGAKKMSLH QTGFQEVLSA ADLLGRYPRR
LALIGCQPLD LEDWGGPLTA PVRAQIGPAI ELACALLAEW GAPAALRSEP VAADARLLAN
DIDHQSYEMR ARPAE