| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1998 |
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| Symbol | hupC |
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| ID | 5152109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2066187 |
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| End bp | 2066930 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640556939 |
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| Product | Ni/Fe-hydrogenase, 1 b-type cytochrome subunit |
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| Protein accession | YP_001238095 |
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| Protein GI | 148253510 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.130131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGATG CAGTTGCTCG TCCCGCCGAG GCCGAGCCCA ACCTTGCCGC GATCGCGGCC
GACGCAGCCG GCGAGCATGC GGTCGGCCGG CCTACGGTCT ATGTCTACGA AGCGCCCGTG
CGCATCTGCC ATTGGGTGAA CGCGTTTGCG ATCATCGTGC TGATGGTCAC CGGCTATCTG
ATCGGGACGC CGCTGCCGAG TGTCGAGGGC GAGGCGTCGG CAAGCTTCGT GATGGGCTAT
ATCCGGTTTG CGCATTTCGC GGCCGGGCAG GTGCTGGCGG TGTTCTTCCT CGCCCGCATC
CTCTGGGCCT TTGTCGGCAA CCACCATTCC CGGCAGATCT TCTACATTCC GGTGCATCGC
AAGCAGTTCT GGAAGGAGGT GCTGCACGAG ATCCGCTGGT ATGCGTTCCT GGAGCGCGAG
CCGAAGATGT ATGTCGGTCA CAATCCGCTG GCGCAGACGG CGATGTTCAC CGGCTTCACG
CTGTTCGTCG CCTTCATGAT CGTCACCGGC TTTGCGCTTT ATTCGGAGGG CACCGGCATC
GACAGCTGGC AGCACAAACT GTTCGGATGG GTGTTTGCGA TCTGGCCGAA CAGCCAGGAC
GTGCACACCT ATCATCACCT CGGCATGTGG GCGCTGGTGA TGTTCGTGAC CGTGCATGTC
TACGCCGCGA TCCGCGAGGA CATCATGTCC CGTCAGAGCA TCATCTCGTC GATGATCTCG
GGCGAGCGGC AGTTCCGCGA GTGA
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| Protein sequence | MMDAVARPAE AEPNLAAIAA DAAGEHAVGR PTVYVYEAPV RICHWVNAFA IIVLMVTGYL
IGTPLPSVEG EASASFVMGY IRFAHFAAGQ VLAVFFLARI LWAFVGNHHS RQIFYIPVHR
KQFWKEVLHE IRWYAFLERE PKMYVGHNPL AQTAMFTGFT LFVAFMIVTG FALYSEGTGI
DSWQHKLFGW VFAIWPNSQD VHTYHHLGMW ALVMFVTVHV YAAIREDIMS RQSIISSMIS
GERQFRE
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