| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1996 |
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| Symbol | hupS |
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| ID | 5152130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2063270 |
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| End bp | 2064361 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640556937 |
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| Product | uptake hydrogenase small subunit precursor |
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| Protein accession | YP_001238093 |
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| Protein GI | 148253508 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGA CGACAGAAAC CTTTTACAGC GTCATCCGGC GCCAAGGCAT CACGCGGCGC
AGCTTCCATA AATTCTGCAG TCTCACCGCG ACGAGCCTCG GGCTCGGGCC GGTCGCTGCC
AGCCGCATCG CCAATGCGCT GGAGACCAAG CCGCGCACGC CGGTCATCTG GATGCACGGG
CTGGAATGTA CCTGCTGCTC GGAGAGCTTC ATCCGCTCGG CGCATCCCCT GGTGAAGGAC
GTCGTGCTGT CGATGATCTC GCTCGACTAT GACGACACGA TCATGGCGGC GGCCGGACAG
CAGGCCGAGG AGATCCTCGA GGAGACGCGC GCCAAGTACA AGGGCCAGTA CATCCTCGCC
GTCGAAGGCA ATCCGCCGCT CAACGAAGGT GGCATGTTCT GCATCGACGG CGGCAAGCCG
TTCGTCGAGA AGCTGAAGGT GATGGCCGAG GATGCGATGG CCATCATCGC CTGGGGCGCC
TGTGCGTCCT GGGGCTGCGT GCAGGCCGCC AAGCCCAATC CGACGCAGGC CACCCCGATC
GACAAGGTCA TAACCAACAA GCCGATCATC AAGGTGCCGG GCTGTCCGCC GATTGCCGAG
GTGATGACCG GCGTCGTCAC CTTCATCACC ACCTTCGGCA AATTGCCCGA GCTCGACCGC
CAGGGCCGGC CGAAAATGTT CTACTCGCAG CGCATCCACG ACAAATGCTA TCGCCGGCCG
CATTTCGATG CCGGCCAGTT CGTCGAGGAG TGGGACGACG AAGCTGCGCG CAAGGGCTAC
TGCCTCTACA AGATGGGCTG CAAAGGCCCG ACCACCTACA ACGCCTGCTC GACGGTGCGC
TGGAATGGCG GCGTGTCGTT CCCGATCCAG TCGGGGCACG GCTGCATCGG CTGCTCCGAG
GACGGCTTCT GGGACAAGGG TTCGTTCTAC GACCGGCTCA CCACCATCAA GCAGTTCGGC
ATCGAGCGAA ATGCCGACCA GATCGGCATG GTCGCGGCGG GCACGGTCGG AGCTGCGGTC
GCGGCGCATG CCGCAGTGAC GGCCGTCAAA CGACTCGCGA CCAAGCGCGA CGACGCCAAG
CAAGACCATT AA
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| Protein sequence | MGATTETFYS VIRRQGITRR SFHKFCSLTA TSLGLGPVAA SRIANALETK PRTPVIWMHG
LECTCCSESF IRSAHPLVKD VVLSMISLDY DDTIMAAAGQ QAEEILEETR AKYKGQYILA
VEGNPPLNEG GMFCIDGGKP FVEKLKVMAE DAMAIIAWGA CASWGCVQAA KPNPTQATPI
DKVITNKPII KVPGCPPIAE VMTGVVTFIT TFGKLPELDR QGRPKMFYSQ RIHDKCYRRP
HFDAGQFVEE WDDEAARKGY CLYKMGCKGP TTYNACSTVR WNGGVSFPIQ SGHGCIGCSE
DGFWDKGSFY DRLTTIKQFG IERNADQIGM VAAGTVGAAV AAHAAVTAVK RLATKRDDAK
QDH
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