| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1984 |
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| Symbol | pcaC |
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| ID | 5152234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2050260 |
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| End bp | 2050664 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640556925 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_001238081 |
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| Protein GI | 148253496 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG ACAACGAGTT GTTCGAGAAG GGCCTGAAGG TGCGCCGCGA GGTGCTCGGC
GCGGCCTATG TCGATGGCAG CCTCGCCAAG GCCGACGATT TCATGATGGC GTTCCAGCAC
ATCACCACCG AAATGTGCTG GGGCTATGCC TGGACCCGGC CGGGCCTCGA TCGGCGCACC
CGCAGCATCA TCAATCTCGC GATGCTGACG GCGCTCAGCA AGCCGAGCGA ATTGAAGCTG
CACGTCAAGG GCGCGCTCAC CAACGGGGTC ACGGTCGACG AGATCAAGGA GATCCTGCTG
CACGCGACCG TCTATTGCGG CATTCCCGCG GGTCTTGAGG CCTTCAAGGC CGCGCATGAG
GTGCTGCTCG CCGAAGGCGC CATCGCCAAG AAGGACGGCG CATGA
|
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| Protein sequence | MSDDNELFEK GLKVRREVLG AAYVDGSLAK ADDFMMAFQH ITTEMCWGYA WTRPGLDRRT
RSIINLAMLT ALSKPSELKL HVKGALTNGV TVDEIKEILL HATVYCGIPA GLEAFKAAHE
VLLAEGAIAK KDGA
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