Gene BBta_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1513 
Symbol 
ID5152283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1600418 
End bp1601347 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content62% 
IMG OID640556480 
Producthypothetical protein 
Protein accessionYP_001237638 
Protein GI148253053 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.139808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTGC GCAACGTCCT GCTTGCCTTA GGCGGTGTCT TGGTGCTCGT CGGAGCTGGA 
CTCTTCATCG CGTGGTTCAG CCAGATGAGA AGCCGCCCCG TCGCGGTAGT CGAAAGATCG
GTCGAAAGCC GACCGGCAGT TCTGGTGGCG GCCCGTACAA TCGCCCTCGG CACATTGTTG
CGAAAAGAGG ATATCGCCTG GAAGGACGTG ATGCCGGGTG AGGTTCGCCC CGGATATCTC
ATGCGTGGCC AAGTTTCGGA AGCGGAATTC TTGGGCGCGA TCAGTCGGCG CAATTTTGCC
CAGGACGAGC CGCTGATTGC GAGCGAGTTC GTCAAGCCCG GCGATCGGCA ATTTCTCGCT
GCAGTGCTCA AGCCGGGGAG CCGCGCCATA TCGATTTTCG TTGATGCGGC GCAAAGCGCG
GCGGGGATGG CTTTGCCCGG CGATCGTGTG GATGTGATAT TGACGCAAAG CTTCGGCGAA
CAAGCAACCG ATCCCGGGCG CAAGACGGTC AGCGAGACCA TGCTGCGCGA CGTACGGGTG
ATCGCCATCG ATCAGTCTCT GACCCCGTCG ACCAACGTAG CGGCTGCGAT TAGCACCGAG
GCCCGTATTC CGAAGACAGT CACGCTCGAG CTGCTTGAAC GGCAAGCGGA GGCGCTCATG
GTTGCCGCGC AGCTGGGCAA GTTTCAGCTT GCGGTTCTGC CCCTTGAGCG CGTAGCCGTC
GAGCATCCTG AAGAACAGAC GGAGGCCGGG CCAGTCTGGG CATCGGATGT CTCGCCTGCT
CTCAGGGAGG TCGGGCCACC GGCGCTACGG AAATGCAATC CGGATGAGTC GCTTTCCGGG
AGCTCGCTCG AATGCCTGGT CCGCCGTCCA CCCAACTCGT CTGGCGGCAG CGCGCCCTTT
TTTGACCCGG CAAGTCATCG CGCCCGGTAA
 
Protein sequence
MFLRNVLLAL GGVLVLVGAG LFIAWFSQMR SRPVAVVERS VESRPAVLVA ARTIALGTLL 
RKEDIAWKDV MPGEVRPGYL MRGQVSEAEF LGAISRRNFA QDEPLIASEF VKPGDRQFLA
AVLKPGSRAI SIFVDAAQSA AGMALPGDRV DVILTQSFGE QATDPGRKTV SETMLRDVRV
IAIDQSLTPS TNVAAAISTE ARIPKTVTLE LLERQAEALM VAAQLGKFQL AVLPLERVAV
EHPEEQTEAG PVWASDVSPA LREVGPPALR KCNPDESLSG SSLECLVRRP PNSSGGSAPF
FDPASHRAR