Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1454 |
Symbol | |
ID | 5151290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1539277 |
End bp | 1541274 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640556424 |
Product | hypothetical protein |
Protein accession | YP_001237582 |
Protein GI | 148252997 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.236827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGCAC AGTCGCCCTA CACGTCGACG GTCTACGACT GGACTGGCTG GTACATCGGT GCGCATGCGG GGGCGTTGCG CGGCTCTTCG AGTTGGACAG CGACGCCCCT CGGACCTGGC GGGCCGCCTG TGAGCGGATC GTTCGGCCTT CCTCTCAACT TCGATTTCAT GGCCGGAACC GGTACCTACG TGCTCGGCCT GCAAGGCGGG TACAATTACG TTCTGCCATC GCGCGTGATG CTGGGCATCG AGGGTGACGT CAGTGTCCCG AACTCGGACG TCGTGGTGCC TTACTCGGTC AGGGGCGGCC AGACCGTCAT TTCGCCTGCG ATCGGTCAAG TCACCTACAG CGAGGCGGTT ATTCACTACG GCAGTGTCCG GGGTCGCGTC GGCTATGCCT TCGATCACTT CCTCCTGTAC GGCACAGGCG GCTTTGCCTG GACCTATGAT CAGCTGACAC GCAGCCAAGA CGCCTCTCCC GTCACCGGCA GCTTCGTACC GGCAGGCACG CTGGAGACCA AACTGTTGTG GCGGCTCGGA TGGGTCGCCG GGATCGGTGT GGAGATTCCG ATCACCGGAA ACTGGTCGGC CAAGGCGGAG TTTCTGGAAA CCGGATTTGG TCGCAGGGGA GCGTTCTTCG CGGCCTCGAT CGATGCGTTT CGATCTGATT TCGCCACGCA AAGCGTGCGA GTCGGGTTGA ACTATAAGAT CGGCGATACC AATCCGATAT CAGCCCTGAT TACCAAAACC CCGGAGGCGC TGGAGACGGA TCGTTTCGCT TTCCATGCCC AATCGACCCT CCTCGAGCAG TACACCCCGC CGTTTCGTTC GCCCTATGTC GGCACCAACA GCCTCAATCC GAATCAGGGT CGTGAGACCT TTGACGCGAC GCTTTATGCC GGCATGAAGC TCTGGGACGG CGCAGAAGCC TGGGTCAATC CGGAGATGGA TCAGGGCTTT GGCTTGAGCA GTTCGGTAGG CGCAGCCGGA TTCCCAAGCG GGGAGGCTTA CAAGGTCGGC GCGAACTATC CTTACGTGCG TCTCCATCGC GCTTTCCTCC GCCAGACCAT CGACCTCGGC GGCGACGTTC AGAAAATCGA TTCCGGCTTC AACCAATTCG CCGGATCGAC CACGTCCGAT CGCCTGGTGA TCACGCTCGG CAAGATCGGC ATCCCCGACA TCTTCGACAC CAACAAGTAT GCCCACGATC CGCGCAGCGA TTTCATGAAC TGGTCGATCG TCGATACCGG CACGTTCGAC TATGCGGCCG ACGCCTGGGG CTACGCGCTC GGCGGCACCA TCGAGTGGTA CACAGGCCCG TGGACCTTCC GCGGCGGCAT CTTCGATCTG TCGATCGCGC CGAACACGAC CTCGCTGGAT TCCCGCTTCG GGCAATTCCA ATGGATCGGC GAAATCGAGC GTCGCTATTC AATTCTAGGG CAGCCCGGCA AAATCGCCGT CACCGGCTTC CTGACGCGCG GCGGGATGGG GAGCTTTAAC GATGCGATCC AGCTCGCGGC AGTGACGGGA GCACCTGCTG ACATCACCGC GGTCCGCCAC TACCAAAGCC GCGGCGGCAT CAGCATGAAC CTGGAGCAGC AGATCAACGA GAATGTCGGC TTCTTCGCCC GTGCGGGATG GGCGGACGGC CACAAGGAGG CCTACGAGTT CACCGATATC GACCGCAGCG TCGCAGCGGG ATTCTCGATC TCAGGAAGGG TGTGGGGACG CAACGACGAT GTCTGGGGAA TTGCCGGGGT CGACAACGGC ATCACCAACG TTCATCAGGC GTTTCTCAAC GCCGGAGGTC TCGGTATTCT GGTCGGCGAC GGCCAGCTTC CGCATGCGGG CGACGAAAGA ATCTTGGAGA CCTATTACAG CTTTCCTTGG TTTGCCTCGC GGATCACGCT TGATTATCAG CTGATCGTCA ATCCCGCCTA CAATCGGGAC CGAGGGCCGG CTTCGCTACT TGGTGTACGC CTGCATACGC AATACTAG
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Protein sequence | MRAQSPYTST VYDWTGWYIG AHAGALRGSS SWTATPLGPG GPPVSGSFGL PLNFDFMAGT GTYVLGLQGG YNYVLPSRVM LGIEGDVSVP NSDVVVPYSV RGGQTVISPA IGQVTYSEAV IHYGSVRGRV GYAFDHFLLY GTGGFAWTYD QLTRSQDASP VTGSFVPAGT LETKLLWRLG WVAGIGVEIP ITGNWSAKAE FLETGFGRRG AFFAASIDAF RSDFATQSVR VGLNYKIGDT NPISALITKT PEALETDRFA FHAQSTLLEQ YTPPFRSPYV GTNSLNPNQG RETFDATLYA GMKLWDGAEA WVNPEMDQGF GLSSSVGAAG FPSGEAYKVG ANYPYVRLHR AFLRQTIDLG GDVQKIDSGF NQFAGSTTSD RLVITLGKIG IPDIFDTNKY AHDPRSDFMN WSIVDTGTFD YAADAWGYAL GGTIEWYTGP WTFRGGIFDL SIAPNTTSLD SRFGQFQWIG EIERRYSILG QPGKIAVTGF LTRGGMGSFN DAIQLAAVTG APADITAVRH YQSRGGISMN LEQQINENVG FFARAGWADG HKEAYEFTDI DRSVAAGFSI SGRVWGRNDD VWGIAGVDNG ITNVHQAFLN AGGLGILVGD GQLPHAGDER ILETYYSFPW FASRITLDYQ LIVNPAYNRD RGPASLLGVR LHTQY
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