Gene BBta_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1454 
Symbol 
ID5151290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1539277 
End bp1541274 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content61% 
IMG OID640556424 
Producthypothetical protein 
Protein accessionYP_001237582 
Protein GI148252997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCAC AGTCGCCCTA CACGTCGACG GTCTACGACT GGACTGGCTG GTACATCGGT 
GCGCATGCGG GGGCGTTGCG CGGCTCTTCG AGTTGGACAG CGACGCCCCT CGGACCTGGC
GGGCCGCCTG TGAGCGGATC GTTCGGCCTT CCTCTCAACT TCGATTTCAT GGCCGGAACC
GGTACCTACG TGCTCGGCCT GCAAGGCGGG TACAATTACG TTCTGCCATC GCGCGTGATG
CTGGGCATCG AGGGTGACGT CAGTGTCCCG AACTCGGACG TCGTGGTGCC TTACTCGGTC
AGGGGCGGCC AGACCGTCAT TTCGCCTGCG ATCGGTCAAG TCACCTACAG CGAGGCGGTT
ATTCACTACG GCAGTGTCCG GGGTCGCGTC GGCTATGCCT TCGATCACTT CCTCCTGTAC
GGCACAGGCG GCTTTGCCTG GACCTATGAT CAGCTGACAC GCAGCCAAGA CGCCTCTCCC
GTCACCGGCA GCTTCGTACC GGCAGGCACG CTGGAGACCA AACTGTTGTG GCGGCTCGGA
TGGGTCGCCG GGATCGGTGT GGAGATTCCG ATCACCGGAA ACTGGTCGGC CAAGGCGGAG
TTTCTGGAAA CCGGATTTGG TCGCAGGGGA GCGTTCTTCG CGGCCTCGAT CGATGCGTTT
CGATCTGATT TCGCCACGCA AAGCGTGCGA GTCGGGTTGA ACTATAAGAT CGGCGATACC
AATCCGATAT CAGCCCTGAT TACCAAAACC CCGGAGGCGC TGGAGACGGA TCGTTTCGCT
TTCCATGCCC AATCGACCCT CCTCGAGCAG TACACCCCGC CGTTTCGTTC GCCCTATGTC
GGCACCAACA GCCTCAATCC GAATCAGGGT CGTGAGACCT TTGACGCGAC GCTTTATGCC
GGCATGAAGC TCTGGGACGG CGCAGAAGCC TGGGTCAATC CGGAGATGGA TCAGGGCTTT
GGCTTGAGCA GTTCGGTAGG CGCAGCCGGA TTCCCAAGCG GGGAGGCTTA CAAGGTCGGC
GCGAACTATC CTTACGTGCG TCTCCATCGC GCTTTCCTCC GCCAGACCAT CGACCTCGGC
GGCGACGTTC AGAAAATCGA TTCCGGCTTC AACCAATTCG CCGGATCGAC CACGTCCGAT
CGCCTGGTGA TCACGCTCGG CAAGATCGGC ATCCCCGACA TCTTCGACAC CAACAAGTAT
GCCCACGATC CGCGCAGCGA TTTCATGAAC TGGTCGATCG TCGATACCGG CACGTTCGAC
TATGCGGCCG ACGCCTGGGG CTACGCGCTC GGCGGCACCA TCGAGTGGTA CACAGGCCCG
TGGACCTTCC GCGGCGGCAT CTTCGATCTG TCGATCGCGC CGAACACGAC CTCGCTGGAT
TCCCGCTTCG GGCAATTCCA ATGGATCGGC GAAATCGAGC GTCGCTATTC AATTCTAGGG
CAGCCCGGCA AAATCGCCGT CACCGGCTTC CTGACGCGCG GCGGGATGGG GAGCTTTAAC
GATGCGATCC AGCTCGCGGC AGTGACGGGA GCACCTGCTG ACATCACCGC GGTCCGCCAC
TACCAAAGCC GCGGCGGCAT CAGCATGAAC CTGGAGCAGC AGATCAACGA GAATGTCGGC
TTCTTCGCCC GTGCGGGATG GGCGGACGGC CACAAGGAGG CCTACGAGTT CACCGATATC
GACCGCAGCG TCGCAGCGGG ATTCTCGATC TCAGGAAGGG TGTGGGGACG CAACGACGAT
GTCTGGGGAA TTGCCGGGGT CGACAACGGC ATCACCAACG TTCATCAGGC GTTTCTCAAC
GCCGGAGGTC TCGGTATTCT GGTCGGCGAC GGCCAGCTTC CGCATGCGGG CGACGAAAGA
ATCTTGGAGA CCTATTACAG CTTTCCTTGG TTTGCCTCGC GGATCACGCT TGATTATCAG
CTGATCGTCA ATCCCGCCTA CAATCGGGAC CGAGGGCCGG CTTCGCTACT TGGTGTACGC
CTGCATACGC AATACTAG
 
Protein sequence
MRAQSPYTST VYDWTGWYIG AHAGALRGSS SWTATPLGPG GPPVSGSFGL PLNFDFMAGT 
GTYVLGLQGG YNYVLPSRVM LGIEGDVSVP NSDVVVPYSV RGGQTVISPA IGQVTYSEAV
IHYGSVRGRV GYAFDHFLLY GTGGFAWTYD QLTRSQDASP VTGSFVPAGT LETKLLWRLG
WVAGIGVEIP ITGNWSAKAE FLETGFGRRG AFFAASIDAF RSDFATQSVR VGLNYKIGDT
NPISALITKT PEALETDRFA FHAQSTLLEQ YTPPFRSPYV GTNSLNPNQG RETFDATLYA
GMKLWDGAEA WVNPEMDQGF GLSSSVGAAG FPSGEAYKVG ANYPYVRLHR AFLRQTIDLG
GDVQKIDSGF NQFAGSTTSD RLVITLGKIG IPDIFDTNKY AHDPRSDFMN WSIVDTGTFD
YAADAWGYAL GGTIEWYTGP WTFRGGIFDL SIAPNTTSLD SRFGQFQWIG EIERRYSILG
QPGKIAVTGF LTRGGMGSFN DAIQLAAVTG APADITAVRH YQSRGGISMN LEQQINENVG
FFARAGWADG HKEAYEFTDI DRSVAAGFSI SGRVWGRNDD VWGIAGVDNG ITNVHQAFLN
AGGLGILVGD GQLPHAGDER ILETYYSFPW FASRITLDYQ LIVNPAYNRD RGPASLLGVR
LHTQY