| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1340 |
|---|
| Symbol | |
|---|
| ID | 5153155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1425333 |
|---|
| End bp | 1426205 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556323 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001237482 |
|---|
| Protein GI | 148252897 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.562769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTGATGATCC GGCAGGCCCT GATCGATCCG TTCTCGGATT TCGAGTTCAT GCGCCGCGCG
CTGGCCGCCG TCATTGCGCT GTCGCTCGGC TCCGGCCCGA TCGGTGTGTT CCTGATGCTC
CGGCGCATGA GCCTGGTCGG TGACGCCATG GCGCATGCGA TCCTGCCGGG CGCGGCCATC
GGCTTTCTGC TGTCCGGGCT CAATCTGTTC GCGATGACCA CCGGCGGCCT GATCGCCGGC
TTTGCCGTGG CGCTGCTGTC GGGCCTGGTG TCGCGCTCGA CCGGGCTCAA GGAGGATGCG
TCGCTGGCGA CCTTCTATCT CGCCTCGCTG GCGATCGGCG TCACCATCGT GTCCGTCAAG
GGCACCAATA TCGACCTGCT GCACGTCTTG TTCGGCAATA TCCTGGCGAT GGACGATCCG
ACGCTGTTGA TGGTGGCGGG CAATGCCACG ATCACTCTGC TCGTGCTCGC CGTGATCTAT
CGCCCGCTGG TGATCGAGAG CGTCGATCCC TTGTTTCTGC GCACGGTGAG CCGGGCCGGC
GCGCCAGCGC ATCTGATCTT TCTCGGCCTG ATCGTGGTCA ATCTCGTCAA CGGCTTTCAG
GCCCTCGGCA CCCTGCTCGC GGTCGGCCTG ATGATCCTGC CGGCCGGCAT TGCGCGGTTC
TGGTCACGCG ACGTCACGCC GATGATCTGC ATCGCGGTCG CCTCGGCGAT CGTGTCCGGC
TATATCGGGC TGGTGCTGTC GTTCCAGACC CGCATTCCCT CGGGGCCTGC GATCATCCTG
GTCGCGTCGC TCCTCTATCT CGGCTCGGTG CTGTTTGGAC GCGTGGGCGG CGTGCTTCCG
CAGCTGTTTC CGGGACGTCA CCTCGAAGCC TGA
|
|---|
| Protein sequence | MMIRQALIDP FSDFEFMRRA LAAVIALSLG SGPIGVFLML RRMSLVGDAM AHAILPGAAI
GFLLSGLNLF AMTTGGLIAG FAVALLSGLV SRSTGLKEDA SLATFYLASL AIGVTIVSVK
GTNIDLLHVL FGNILAMDDP TLLMVAGNAT ITLLVLAVIY RPLVIESVDP LFLRTVSRAG
APAHLIFLGL IVVNLVNGFQ ALGTLLAVGL MILPAGIARF WSRDVTPMIC IAVASAIVSG
YIGLVLSFQT RIPSGPAIIL VASLLYLGSV LFGRVGGVLP QLFPGRHLEA
|
|---|
| |