| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1308 |
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| Symbol | exbD |
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| ID | 5148838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1396778 |
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| End bp | 1397233 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640556294 |
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| Product | biopolymer transport exbD protein |
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| Protein accession | YP_001237453 |
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| Protein GI | 148252868 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.47684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.431843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTTT CTCTCTCGGA AGCCGATGGT GACGATGATC TCGGCGAATC CAGCGACATC
AACGTCACCC CGTTCATCGA CGTCATCCTG GTGCTGCTCA TCATCTTCAT GGTGGCGGCC
CCGCTCTCGA CGGTCGACGT GCCGGTCGAC CTTCCAACCT CGACGGCCAC GCCGCAGAAG
AAGCCGGACA AGCCGATCTA TGTCAGCATC AAGCCGGATC TGACATTGTT CGTCGGCGAG
GAGCAGGTGA AACGAGCAAG CCTGGTCGGT TCGCTCGAGC ACATCCCGGA GGCGACCAAG
GACAAGTTCG TCTTCCTGCG CGCGGACCGC GGGGTACCCT ATGGCGAGCT GATGGATGTG
ATGGAGTTGC TGCGCACCGG CGGCTATTCG AAGATCAAGC TCGTCACCGT CGAAGGCGTT
TCGCAGGCGG CCGCGACCGC TCAGCCTGTG CATTGA
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| Protein sequence | MAVSLSEADG DDDLGESSDI NVTPFIDVIL VLLIIFMVAA PLSTVDVPVD LPTSTATPQK
KPDKPIYVSI KPDLTLFVGE EQVKRASLVG SLEHIPEATK DKFVFLRADR GVPYGELMDV
MELLRTGGYS KIKLVTVEGV SQAAATAQPV H
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