| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1300 |
|---|
| Symbol | |
|---|
| ID | 5156239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1388536 |
|---|
| End bp | 1390011 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556287 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237446 |
|---|
| Protein GI | 148252861 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.865676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA GTTCGACGTT GCAATGGCTG CGGGCGCCCA GGCTCGCCGA GGACACGCTG
CCGCCTGAGT CGCTGAAGGT GGAGTGCCGG CGCTGCGGCC GTTCGGTGCA GGTGTCGCTG
AGTGCGATGC GCCCACCGGG TTTCCTGCAC GTCGACGATC AAGTGGCATG TCCCGAGATC
CAGGAACGCT GGACCGGCAA CGGCAGCGGC GGATTGCTGC TGATGATGTG CGGGGCGTTG
GAGCAATCGC TCGATCCCGT CTCGGACATC GAACATCATG AGGCGGCGGT ACAATACGAG
CCGGCGCCGC TCGTCGCGCA GCGGATCGCT CCGCAGCCGA TGAAGCTGTC CCCGCCGAGT
TGGGACGACA GCGCGGATGA TCAGGACGAC GCGGAGCGGA CCGGCCGGCT GCACGTCCTG
CTTGCGCGGT TTGTCGAACA CCGCAAGGCG TTCATCCGGG TCACCGTCGG GGTCGTTGCA
CTGGTCGTGG TGGCGGTGGG CGGTGTGCTC CTGCCGCTGC GCAATCTGCA GATTCTGATC
CAGGCTCCGC CTGGACTCTC CGCCGTCTCG CTGCAGAGGG AGCCGTTGCC AACCTCGGTC
GCGGTGCGCC GAACCACGAT GGATGCGGCC GCGCCGTCAA CCCAGGCGCC GTCGAGCCAG
CGAACGCCGT CAGCACCGCC GGTTGCCATG CGCCAGCCGC AGGCCGCGGA CCCGTTGCCG
CTGCCCGAGG GGCCGTCGGC CGGAAACCCG AAGCCGGTCG TGTTGGCGGA TGCCGCCAGC
GCGCAGCCGA AGCTGCGCGT GCCCGAGACG GTCGCGATCC CCGGGGGAAC GTTTGCGATG
GGCGGCGAGG ACGATTCCGA GCAGCCCGTT CACCAGGTCA GCATCCGGCC ATTTGCGATG
GGCAAATATC CGGTGACGGT CGGAGAGTGG AAGGCGTGTG TCGCGGCGGG AAGCTGTGCC
GACATCGCCG CTGGAAGCGA CGATCAACCG GTCACCAATG CGAGCTACGA CGACGCGCAA
GCCTATCTCG GCTGGCTCGC CAAGGTGACC GGCAAGGCAT TCCGGCTGCC GACCGAGGCC
GAATGGGAAT ACGCCGCTCG CGCCGGGCGG CGCAGCAAAT ATTGGTGGGG GGATCGCATG
CGCCCGGGCA TGGCGAACTG CAAGGGCTGC AACACTGCCA GTGAGACGTC CGACGCTGCG
CAACCCCTGA AGGTCGGAAG CTTCGCCGCC AACCCGTTCG GCCTGTTCGA CATGGGCGGC
GAAGTGGCCC AGTGGGTCGC GGACAATTGG CACAAATCCT ACAAGGGAGC CCCGGCGGAC
GGGGCGGCAT GGCTCGATGA CGGCAGCTAC GCCCGTGTGA TCCGCTCCGG CTCCTGGAGC
AATGGCGCAG CCGATGCGCG CGCGGGCAGC CGCGACCGCT ACGATGGCCG CATCCGTCAT
CCCACGCTCG GTTTCCGGGT CGCGCTTACA CCATAA
|
|---|
| Protein sequence | MSESSTLQWL RAPRLAEDTL PPESLKVECR RCGRSVQVSL SAMRPPGFLH VDDQVACPEI
QERWTGNGSG GLLLMMCGAL EQSLDPVSDI EHHEAAVQYE PAPLVAQRIA PQPMKLSPPS
WDDSADDQDD AERTGRLHVL LARFVEHRKA FIRVTVGVVA LVVVAVGGVL LPLRNLQILI
QAPPGLSAVS LQREPLPTSV AVRRTTMDAA APSTQAPSSQ RTPSAPPVAM RQPQAADPLP
LPEGPSAGNP KPVVLADAAS AQPKLRVPET VAIPGGTFAM GGEDDSEQPV HQVSIRPFAM
GKYPVTVGEW KACVAAGSCA DIAAGSDDQP VTNASYDDAQ AYLGWLAKVT GKAFRLPTEA
EWEYAARAGR RSKYWWGDRM RPGMANCKGC NTASETSDAA QPLKVGSFAA NPFGLFDMGG
EVAQWVADNW HKSYKGAPAD GAAWLDDGSY ARVIRSGSWS NGAADARAGS RDRYDGRIRH
PTLGFRVALT P
|
|---|
| |