| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1244 |
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| Symbol | |
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| ID | 5152709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1321438 |
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| End bp | 1323687 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640556230 |
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| Product | putative Phage / plasmid primase P4 |
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| Protein accession | YP_001237390 |
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| Protein GI | 148252805 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.372159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.928701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC GATCAACTGA CATCTTGGAT CTTGTTCATC AGTTTGCAGA ACGAGACCTA
CCCGTTCTGC CCCTTCTTGC CGAACAGAAG CGCCCGGCGA TCAAACGCGG TGTACATGGC
GCGACGACGA ACAAGAAAGA ACTCAAGCGG TACTTTCGAA ACAATCCTCA GGCCAATTAC
GGGGTCAGCA CCGGCGGAAC ATCGAACATC TTTGTGCTCG ATATCGACGG GCGCGCCGGG
AAGCACTCTC TGTCGAAGTT GATTTCCGAG CATGGCAAGC TGCCAAGGAC GGTTACGGTT
CTGACCGGAA GCGGCGAACA CCGTTACTTC AGAGGCAACG GAACGCCGAT TAGGAACTCG
TCCGGAAGGC TCGGCGAAGG TCTCGATATT AGAGGCGACG GCGGCTACGT CGTAGGCCCC
GGTAGCATTC ACCCCTCCGG TAAAGTTTAT TCCTTCAAGG AAGGGCGGGC ACTAGATGAC
GTGGCAATTG CGAAAGCTCC GCCCTGGCTT CTCTCTCTGA TTAGCTCAGA TCGCCCGCAC
CAGGCCACCA GGATGCAGCT TGAAGTGCCA ACCAATAACT CGCGCCGGTT GGCCGCATAC
CTGGTCGCAG CGCAAGACCG TGAATTGGAG CGGCTCTCAA GGGCACCGAA TCACCGGCGG
AATCACTGCT TAAATCGGAG CGCCTTCAAG CTTGGGCAGC TACTTCCCTA TAGAATTCTT
GATGAAGGCG GCTGCACGCG CAAGCTTTCC GAGGTTGCGC GGAGCATCGG TCTCGAAGAA
TCAGAGATCA TTCCTACGAT CCGCAGCGGT CTGTCCGCTG GGAGCCGTAA CCCTCGTCCC
CTGCATTTTC TGAAATGCCA GATCGACAAT CCAGCCGTTG CCAAAAACGA GTCTCAAACC
CCAGAGCTGA CAATCGAACT CGCTAAGCTT CGTGAAAATG ACACGGACAA TGCACAGCGT
TTCGCATCGC GCTGGGCTGA CCGCATTCTC TATACCCCCG GAAAGGGGTG GCTTGTTTTT
GACGGCAAGC GCTGGAAGCC CGACAGCCTT CTGGAATGCA TGGAGTTCGC GAAAATCACA
GCCCGCATGA TCGCTTGCGA GGCGCAACAC TTGCCGGATG ATCAAGCAAA AGCGACTCGA
AGGAAGTTCG CCGATAGCTC TCTTTCAAAG GGCTCGTTGG AGCGGATGAT CGACCTGGCG
AAGAGCTTAG TGATGGTAGA CGATAGCAGG CTGGATGCAA ACCCGTGGCT GCTGAATACC
ACAACCGGAA CTATTGACCT TCGAACCGGA GATTGTGACG ATCACGACCC TCGCGACCTC
CTAACCAAGA TGATACCGGT CGCCGCCGAC CCAACAGCAA AGTGCCCCCA GTTCAGAAAG
TTTCTGAACC GTATAACGGG CGGGGATCGC GCCTTGATGA GATATCTCAA GAAGTGCGCG
GGGTATACTT TGACAGGGTC CACTCAGGAG CAGGTCTTCT TCTTTTGCTA CGGGAAGAGC
GGCAGCAACG GGAAGTCCAC TCTTATCAAC CTGCTGCGGG ACATGCTGGG CGACTACTCA
CGTCACACTC CAACGGAGAC ATTGCTTACT AAGCAGTATG ACAACAACAT ACCTGCCGAT
CTGGCGCGGT TAGCTGGAGT TCGCATGGTC ACAGCCATTG AGGCAAACTT TGATCGCCAC
TTGGATGAGG CCAAGCTAAA AAGCATGACC GGCGGTGAGC CGATTACGGC TCGGTTTATG
CGGCAGGACT ATTTTGAATT CACTCCCGCC TTCAAACTGT GGCTCGTGGC GAATGATATG
CCGCGCGTGC GCGGCACCGA CACAGCGTTC TGGCGGCGGG TACGGGTCAT CCCATTCGAC
GTTCAAATCC CCGAATCGGA AAAGGATCCC GAACTTCCGG CGAAATTGCG AGACGAATTT
CCCGGCGTTC TAGCCTGGGC CGTGCGGGGC TGTAAGGCGT GGCAAGCCGA AGGTTTGGCC
GAGCCTCAGA CGGTGAAGCT TGCTTCTGGG CGATGGCTCG AAGCAGCCGA TCATCTCAAG
AGGTTCGTTG CGGAGTGCTT GATTGTTGAT CCTGAAAACA GGCTGCCCTC GTCATCGCTG
CTCAACCGGT ACAGCAACTG GTGTAGCAAG AATGGAGAAC AGCCGCTGAC CGTTCAAAAG
CTAAATGCTT CATTACGCGA AGCTCACAAC TTCACCCACA AAGAGTCAAA ACATGGAAGT
GAATGGGTCG GCTTGAAGCT CCGGCTGTAG
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| Protein sequence | MKKRSTDILD LVHQFAERDL PVLPLLAEQK RPAIKRGVHG ATTNKKELKR YFRNNPQANY
GVSTGGTSNI FVLDIDGRAG KHSLSKLISE HGKLPRTVTV LTGSGEHRYF RGNGTPIRNS
SGRLGEGLDI RGDGGYVVGP GSIHPSGKVY SFKEGRALDD VAIAKAPPWL LSLISSDRPH
QATRMQLEVP TNNSRRLAAY LVAAQDRELE RLSRAPNHRR NHCLNRSAFK LGQLLPYRIL
DEGGCTRKLS EVARSIGLEE SEIIPTIRSG LSAGSRNPRP LHFLKCQIDN PAVAKNESQT
PELTIELAKL RENDTDNAQR FASRWADRIL YTPGKGWLVF DGKRWKPDSL LECMEFAKIT
ARMIACEAQH LPDDQAKATR RKFADSSLSK GSLERMIDLA KSLVMVDDSR LDANPWLLNT
TTGTIDLRTG DCDDHDPRDL LTKMIPVAAD PTAKCPQFRK FLNRITGGDR ALMRYLKKCA
GYTLTGSTQE QVFFFCYGKS GSNGKSTLIN LLRDMLGDYS RHTPTETLLT KQYDNNIPAD
LARLAGVRMV TAIEANFDRH LDEAKLKSMT GGEPITARFM RQDYFEFTPA FKLWLVANDM
PRVRGTDTAF WRRVRVIPFD VQIPESEKDP ELPAKLRDEF PGVLAWAVRG CKAWQAEGLA
EPQTVKLASG RWLEAADHLK RFVAECLIVD PENRLPSSSL LNRYSNWCSK NGEQPLTVQK
LNASLREAHN FTHKESKHGS EWVGLKLRL
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