Gene BBta_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1215 
Symbol 
ID5154760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1295196 
End bp1298243 
Gene Length3048 bp 
Protein Length1015 aa 
Translation table11 
GC content52% 
IMG OID640556202 
Producthypothetical protein 
Protein accessionYP_001237362 
Protein GI148252777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00486213 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC GAATTTTTTT GGGGGCTGTG TTCGTACTAT TTCTGGGCGC GCCAGCTAAC 
GCCGCGTCGG AAATCGATAG AGCTGTCTGG GTTGGCAACG CCTCCTATCA GATCAGCAGG
GGACGGAACT GGGAATACGT TGACTATCTT GATCGAACAG TCTCGATCAG TGCAGGCGGC
CCGAGCAGTC AAGTCTGGGT CCATGAAGCA GATGCACTAA AGCATCGAAC GTTCATAGAT
TCTCTTGACC AAAGTGGATT GCCTAGGACA GGTGTCCAGC ATAGCGAGTT TTTGGATCCA
GAAGCCTCTC GCGCGAACAA AATATATGAG GCTTTAAAGC AGGCCGGTCC CCCAGGCTTT
TTGGTCGGGG ACTGGCTTCA GAGCCAACTG CGCACCGCTA TCGAGCCTCG CGAGATGCTC
CTCTTGTCGC AACAGAATCG TGCGGCGAGC AACTCCTTCC GGACCAACGC CAGGCGTCTA
ACTGAAGTAC TCGGAGCCGT TTACGATCTT GCGCAAAAGG ATAAGACTTA CGGCGAGTTC
ATCGACGTTG TATTTGGAAG AAGGTTTGGG GCGAACACGA ACGACGCCGC TGACACGATT
TTAGCGAACA ACCCGGACTA CGCGAACAAT CGATATGTTC GACAACTGGT AAAGAGCGGG
GGATCTGCTC AGGATCGTGC TGTACGGTTA GTTGAGGCAG TTAAGCGCGA TCTACAAGCA
AAGATCGACG GGATGGGTTC GGAGGTATCC CGAATAGCAG GCAATCTGCG CCGAGAAGAG
GACATTTCGG TTAAGGCGAG TTCAAAAAGC GAGGAAGCAT TCAAAAAAAT CATCTTGAGT
GCGGAAGCGC AGAACCGCGC CGCGATTGTT CGGGCTGAGG TAGAAGACCT CCGCGCAGCA
GGCTTCGTAG TATCTGCTTT CTTGAGCGAC CGCGACCTCG CGCGTGGCAT TAACGCGACA
ACACAAGCGG TCGGTCAGTT CTACACCTCT GTGAATGACT TCGAGCAGAA CCAGCTACTA
CTGAAAGCTC GCCATGGAGA GAACCTAGCC ACAGCTATGA GCGCGGCAGC TTTGACATAC
AACTTCTTGT CGATTGGGTT GTTGCTAAGT CAAGCATTCG GACCACATCA GGATTCCCCT
GACGCAATCA TATTGTCTGC AATTAAGGAG CTTTCTAAGC AGCTTGCCGA GTTCCAGAAA
GAAGTTCGCG CTCGGTTTGA CCATATCGAT TGGGAGCTAA ACGAAATCTA CTCCTTGATG
GTGCGAGATT TCGCGTCTTT GGCCGAATCT ATTGGCCGTG TTCGCTATGA TGTCGAGGCA
GCACAGCGGG CCATTGACCG GATTGCGCTA CGGCTCGATG CCTTTCAGCG AAACACACTA
GCGCGCCTGG ATCTGGCGAT TGACCAGCGG TTTCACGCTG AGATGGAAAA ATGTCTAGGC
TACGAACAAA GAACTGGCCG ACGCCTAACG CAAGAAAGAT ATAGCGACTG CGTTGCAGAG
ATTATTTCTT ATCTAAAGGA GGCACGAGAT CCGACTCGCT CTGATTATTG GGACGCTTCT
TTGGATACGC CACAATCGCT AGCCGAGAGA CTGAAAGATG AGGATTGGCC CGCACACGTC
AATTTGTTTC GAGGCATGGC AAGGGCAAGA GCTGGATTTG AGTTCGGCGG CATTCGCGCT
AACCCAACGA GATGGGCGTT AGCTTCAGCA GCATTCGTTG ATCTTTCCGC TGAGAACATT
GATTACTTCC GGGCGTCGCC GTTGGTCGAT TTTGACGCTC TAAACAGCGA AGGCGAAGCC
CTATCTCGGG AGTTCGGGTG GGAGATCAGC TTTAAGCAGC CCGCGCGGAT ACTCAATCTG
TATCGCGATT TGATCGTTCG CTACAACGAA TCTTTAAAGC GGACCCAGGC CGCGGCCGCT
GAAGTCCGGA AGAACGCGAT AAGCGCGTTA GGTAGTCAGC TTGCAGATGC TTCTCCTTCG
CTTGAAACTG CCTCTCCCGA AGTTAAGGTT CTAGCTTCGA CGATTGCGAA ACGTGAGATT
CGACACGCTG CTAGAACAAG CGAGGACTTG ATTGCAATAA ATAAGAAGCC ATGGCCAAGC
GTTGGGCCGC AGACCCCGCG TGGTCCTGTT GTTGGTGATG AGCGTTGGCC GAACGTATTT
AACCCTGAAA AGGTTTGGGC TGCAATTTTA CAGAACGATG ATCTTCTAAA ATGGGAGATG
CTTGGGTTAG GCAAATTGGA ACTGACTTAC ATCGCATACT ACTCAAATGT GGCTACTGGC
GAATATCAGA TATACGCTGC GCCGACAATT GGTTACTGGC TACAAGCCAA AGACAAGGCG
AGCGGAACGG TTACTAAGCT GGCGAGTGCT ACAGTCGGGC AGAAGAGCCG GGTGTGGTTG
GGATGGAATG GCGGAGGTAG TCACCTTATC CAAAATACTG CGTTCGATTT TTCGAACTAT
CTAAAAGAGA CTGAGTTGCC GTTTGGGTTG CCGCAGTTTT CACTCGACCT AGATGCGAAG
ACAATTGAGC AGCAGGTCAG CGCAGCGAGC GAAATCATGG CTACTCGCGT TCGTGAGGAG
CTGATCAGTA AATTGAAATC TTCGACCAGC GACCTCTCGC AAGCACTCTT CGAGCTCGAC
GGATGCGTTC GCGCATTGAG GGGATTAACG GTTCTTGCAT TTCCAAGGTC AGTGGCCGTG
AATGATGATC TACGAGCCAT TTTATTTGGG CAAGATGATG CGGGCAGCCA GGAGCAGATT
GCGCCCTTGC TGACGAGCAA AAACGCTTTC AATTTGGTTC TTTGGCCTGA CCTTCAAAAG
GCGCGACAGG GCGCTCAAAA CGCTCCTAAA GGTGGAGGTC CAGAGCAATG GCCACCGTCT
GTTTTCCTGA GGGATCTGGA CGCGCGGACC GAAAATAGTG AGCGAGTCCT TCTAGAAGTG
ATCGAATCAA TCGTCACCGA CAAGTCTGCA GGTCCGCAAT CCCAGGCAGT CGTCAGCGAG
GGGCTGCGAA GGCTAGAGAC GCTCAAAAAT CTCAGATCGC TACAATGA
 
Protein sequence
MTARIFLGAV FVLFLGAPAN AASEIDRAVW VGNASYQISR GRNWEYVDYL DRTVSISAGG 
PSSQVWVHEA DALKHRTFID SLDQSGLPRT GVQHSEFLDP EASRANKIYE ALKQAGPPGF
LVGDWLQSQL RTAIEPREML LLSQQNRAAS NSFRTNARRL TEVLGAVYDL AQKDKTYGEF
IDVVFGRRFG ANTNDAADTI LANNPDYANN RYVRQLVKSG GSAQDRAVRL VEAVKRDLQA
KIDGMGSEVS RIAGNLRREE DISVKASSKS EEAFKKIILS AEAQNRAAIV RAEVEDLRAA
GFVVSAFLSD RDLARGINAT TQAVGQFYTS VNDFEQNQLL LKARHGENLA TAMSAAALTY
NFLSIGLLLS QAFGPHQDSP DAIILSAIKE LSKQLAEFQK EVRARFDHID WELNEIYSLM
VRDFASLAES IGRVRYDVEA AQRAIDRIAL RLDAFQRNTL ARLDLAIDQR FHAEMEKCLG
YEQRTGRRLT QERYSDCVAE IISYLKEARD PTRSDYWDAS LDTPQSLAER LKDEDWPAHV
NLFRGMARAR AGFEFGGIRA NPTRWALASA AFVDLSAENI DYFRASPLVD FDALNSEGEA
LSREFGWEIS FKQPARILNL YRDLIVRYNE SLKRTQAAAA EVRKNAISAL GSQLADASPS
LETASPEVKV LASTIAKREI RHAARTSEDL IAINKKPWPS VGPQTPRGPV VGDERWPNVF
NPEKVWAAIL QNDDLLKWEM LGLGKLELTY IAYYSNVATG EYQIYAAPTI GYWLQAKDKA
SGTVTKLASA TVGQKSRVWL GWNGGGSHLI QNTAFDFSNY LKETELPFGL PQFSLDLDAK
TIEQQVSAAS EIMATRVREE LISKLKSSTS DLSQALFELD GCVRALRGLT VLAFPRSVAV
NDDLRAILFG QDDAGSQEQI APLLTSKNAF NLVLWPDLQK ARQGAQNAPK GGGPEQWPPS
VFLRDLDART ENSERVLLEV IESIVTDKSA GPQSQAVVSE GLRRLETLKN LRSLQ