Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1190 |
Symbol | |
ID | 5155664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1262689 |
End bp | 1263303 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640556173 |
Product | hypothetical protein |
Protein accession | YP_001237340 |
Protein GI | 148252755 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.995327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTCGATA GCGAGAAAAT CGCCCTCAGC GTTTTGGCCC GTGCAGCAGC CGACGAAGGA ATATCCATCG ACCTGGAAGA GGCCAAAAGG CTCTTTCGCG GGTTGAAGTT CGCCGATTGC GTGCGAGAAA TCGAACGGCG ATTGGGGCAC CGCGTCGGCG AGGATTTCGA GGCTGGCGTG AGGCGAGCAA CTGCACTGGC ATTTGAAGCC GAACTGCAAC CCGTCGAGGG GATACATGCG GCGCTTGCGG AGATCACTCT TCCGTTCTGC GTCGCATCGA ACGGGCCGAT GTCGAAGATC AGGCACGCAC TCGGACTGAC AAAATTGCTG AACTATTTCG AAGGCCGCAT CTTCAGCGCC TACGACGTCG GCTCGTGGAA GCCTGACCCT GATCTTTTCC TGCACGCTGC GCAGACCTTC GGGATCGCCC CCGGGCGCTG CGTCGTGATC GAGGACTCGT TGTCAGGCGT CACTGCGGCG CATGCTGCGG GCATGCAGGT CATCGGATTC AGCGGCGGTG ATCCGGACGT CGAACTGCAA TTGGCGCCCG TCCGTGCAAA TCTTTTGCAG CAAATGCGGG ACCTTCCGAA GCTGCTCAAG ATGGGCGGGC GCTGA
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Protein sequence | MVDSEKIALS VLARAAADEG ISIDLEEAKR LFRGLKFADC VREIERRLGH RVGEDFEAGV RRATALAFEA ELQPVEGIHA ALAEITLPFC VASNGPMSKI RHALGLTKLL NYFEGRIFSA YDVGSWKPDP DLFLHAAQTF GIAPGRCVVI EDSLSGVTAA HAAGMQVIGF SGGDPDVELQ LAPVRANLLQ QMRDLPKLLK MGGR
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