| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1182 |
|---|
| Symbol | tyrC |
|---|
| ID | 5154875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1256735 |
|---|
| End bp | 1257670 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640556168 |
|---|
| Product | cyclohexadienyl dehydrogenase |
|---|
| Protein accession | YP_001237335 |
|---|
| Protein GI | 148252750 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG CGGGAAAATT CGAACGCATT GCGCTGATCG GCTTTGGCCT GATCGGCGGC
TCGATCGCGC GCGCAGCGCG GCAACACGGG GTGGCCGGCG AGATCGTCAC GACGGCCCGC
TCCGAGAAGA CGCGGGCGCG CGTCACCGAG CTCGGCATCG TCGACCATGT CGTTGCGAGC
AATGCGGAGG CGGTGAAGGA TGCCGACCTC GTCATCCTCT GCATTCCTGT GGGGGCGTGC
GGCCCAGTGG CCGAGGAGAT CGCGCCGCAT CTGAAGCCCG GAGCCATCGT CTCGGATGTC
GGCTCGGTCA AGGGCGCAAT CGTCCGCGAC ATGGCCCCGC ATCTGCCGGC GAACGTGCAC
TTCGTGCCGG CCCACCCGGT GGCAGGAACG GAGAATTCGG GGCCGGATTC CGGCTTCGCC
GAGCTGTTCA TCAATCGCTG GTGCATCCTG ACGCCGCCGG ATGGCGTCGA TCCCGACGCC
ATCGATCGTC TCCGCGCGTT CTGGGCCGCG CTGGGCGCCA AGGTCGAGAT CATGACGCCG
GACCATCACG ACCGGGTGCT CGCGATCACC AGCCATCTGC CGCATCTGAT CGCCTACACC
ATCGTCGGCA CCGCCGACGA GCTGGCGCAG GTGACGGAAT CGGAGGTGAT CAAGTTCTCC
GCCGGCGGCT TCCGCGATTT CACCCGCATC GCCGCCTCCG ACCCGACGAT GTGGCGCGAC
ATCTTCCTGA GCAACAAGGA CGCCGTGCTC GACATGCTCG GCACCTTCAC CGAGGACCTC
TCCAAGCTCA CACGCGCGAT TCGCCGCGGC GACGGCGAGG CATTGTTCGA TCACTTCACC
CGGACCCGCG CGATCCGCCG CGGCATTGTC GAGGTCGGCC AGGATTCGGC GGCGCCCGAT
TTCGGCCGGC CGCTGCCGCA GATCAAGAAG CCCTAA
|
|---|
| Protein sequence | MSVAGKFERI ALIGFGLIGG SIARAARQHG VAGEIVTTAR SEKTRARVTE LGIVDHVVAS
NAEAVKDADL VILCIPVGAC GPVAEEIAPH LKPGAIVSDV GSVKGAIVRD MAPHLPANVH
FVPAHPVAGT ENSGPDSGFA ELFINRWCIL TPPDGVDPDA IDRLRAFWAA LGAKVEIMTP
DHHDRVLAIT SHLPHLIAYT IVGTADELAQ VTESEVIKFS AGGFRDFTRI AASDPTMWRD
IFLSNKDAVL DMLGTFTEDL SKLTRAIRRG DGEALFDHFT RTRAIRRGIV EVGQDSAAPD
FGRPLPQIKK P
|
|---|
| |