Gene BBta_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1126 
Symbol 
ID5153180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1199698 
End bp1200987 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content70% 
IMG OID640556114 
Producthypothetical protein 
Protein accessionYP_001237281 
Protein GI148252696 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.341163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGT CCGAGATCAT GACCCTCAGC TCCAGCCGCG AACTCGTCGC AATCGTCGTC 
GCGCTCGGCA TCGGTCTGCT GATCGGACTC GAGCGGGAAC GACGGAAGGG CGAGGGGCCG
GGACGATCGC CGGCGGGATT GCGGACCTTT GCCGTCGCGT CGCTCGCGGG CGCTATCAGC
ATGCTGATCG GCGGCAAGAT GCTGCTCGCG GTCGTCACCG CCGGTGTCGT CGTCCTGACG
GCCATCGCCT ATTCGCGGTC CCGCAGCGAT GATCCCGGAC TGACGTCGGA GACGGCGCTG
GTCCTGACGG TTCTGCTGGG GGGGCTCGCC ACCGAGCACG CCGCTTTGGC AGCCGGAGTC
GCGGTGATCC TGACGGTGCT GCTCGCCGCC CGGCCGGTGC TGCACGGCTT CGTGCGCTCG
GTGCTGAGCG AAGGCGAGCT CAAGGACGGA CTGATCTTTG CCGCGGCCAC CCTGGTGGTG
CTGCCGCTGC TTCCCGACCA GCCGATCGGT CCGTTCGGCG CGCTCAACCT GCGCTCGATC
TGGATGCTGG TCGTGCTGAT GATGGCGATC GGGGCGGCCG GGCATGTTGC GATGCGCCTG
CTCGGCGCCC GCGGCGGACT CGCAGTGTCC GGCTTTGCCT CCGGCTTCGT CTCCAGTACG
GCCACGATAG GAGCGATGGG CGCCCGCGCG CGGAAGCTGC CTGAGCTGGC CGGAGCCGCC
GCGGCGGGCG CAACGCTGTC CACGCTTGCC ACCATCGTGC AGCTCGCTGC GGTGCTGGCG
GCAACCAGCG TGCCGGCATT CAAGGCGCTG CTGATCCCGC TATTATGTGC GGGCGGGGCG
GCCGCGCTCT ATGGCGCGGT CTTCACTGTC CTCGGCCTGC GGCAGACGGG CTCCGCGGAC
CTGGAGCTCG GACGCGCTTT CAGCCTGCCC GGGGCCTTGT TGCTGGCATT GACGATCTCC
GTGGTGCTCG TGCTCTCCGC CGGTTTGCGC CAGGCCTTCG GCGAGGCCGG CCTCGTGGTG
AGCGCCGCGG TGGCCGGCCT CGTCGACACG CATGCGCCGG CGGCGGCGGC TGCCACGCTC
GTCGCCTCCG GGAAGATCAG CACCGCCGAA GCGGTCATTC CGGTGCTCGC GGCGCTGACG
GCGAACACCA TCAGCAAGAT CGTCGTGGCA TGGACCAGCG GCGGCGGGTC ATTCGCGGCG
CGGCTGATAC CGGGGCTGAT TGTCGTCGTC GCCGCGGCCT GGGCCGGCGC GTTCGCCCCG
ATCCTCGCGC ATGCTGTCTT CACGTATTGA
 
Protein sequence
MSMSEIMTLS SSRELVAIVV ALGIGLLIGL ERERRKGEGP GRSPAGLRTF AVASLAGAIS 
MLIGGKMLLA VVTAGVVVLT AIAYSRSRSD DPGLTSETAL VLTVLLGGLA TEHAALAAGV
AVILTVLLAA RPVLHGFVRS VLSEGELKDG LIFAAATLVV LPLLPDQPIG PFGALNLRSI
WMLVVLMMAI GAAGHVAMRL LGARGGLAVS GFASGFVSST ATIGAMGARA RKLPELAGAA
AAGATLSTLA TIVQLAAVLA ATSVPAFKAL LIPLLCAGGA AALYGAVFTV LGLRQTGSAD
LELGRAFSLP GALLLALTIS VVLVLSAGLR QAFGEAGLVV SAAVAGLVDT HAPAAAAATL
VASGKISTAE AVIPVLAALT ANTISKIVVA WTSGGGSFAA RLIPGLIVVV AAAWAGAFAP
ILAHAVFTY