Gene BBta_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1111 
Symbol 
ID5152717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1182025 
End bp1183470 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID640556100 
ProductFAD binding domain-containing protein 
Protein accessionYP_001237267 
Protein GI148252682 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.287749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGA GACGACGGTT TCTGCACACC GCAGCGACGG CCGCGGCGCT GCCTTTGGCG 
CGGATGCCGC GGGCCCAGGC CGAGTTACGC ACCATCCTCA ACGATGCGAG CCGGCTCAAT
CCGACGCCGG TCGCCAGGCA CGTGGTGATC TCCAGGCCCA CCACTGACGA TCTGATCGCC
CGGCTCCGCG CCGAGCTGAA GGAGGCGGCG GCCGCCAAAC GTCCGGTCAC TGCCGCCGTG
GCCAGGCATT CGATGGGCGG TCAGAGCCTG CCGCGGGACG GCACCGCCGT GACCCTCGAC
GGCGGCCCGA TCGAGCTCGA CACCACGGCG CAGACCTATC GCACCGCTGC CGGCAACCGC
TGGTGGGACG TGATTGCCGC GCTCGACCCG AAGGGCTTCT CCCCGGCGGT GATGCAGTCG
AACAGTGATT TCGGCGTCGG CAGCACGTTC AGCGTCAATG CACATGGCTG GCCGGTGCCC
TATGGACCGT TCGGCTCCAC GGTGAAGTCG ATCCGCATGC TGCTCGCCGA CGGCACGCTG
GTGACATGCT CGCGCACGGA GAACGCCGAA CTGTTCGGGC TGGCGATGGG CGGCTATGGC
TTGTTCGGCA TCATCGTCGA TCTCGAGGTC GAGATGGTGC CGAACCTGCT GCTCGAACCG
CGCTTCGAGC GCCTGCCGCC GGAGACCTTC GCCGCGCAGT TCACGCGCGC GATCGACGGC
GATGGCCCTG TGAAGATGGC CTATGGCCGG ATGTCGGTTT CGCGCAAGGC GTTCTTCGAC
GACGCGCTGC TCGTCACCTT CCGCCCCGCG CCCGATGCGC CCGCGACGCT GCCGCCGGCG
GCGAACTCGG GCAAGCTGAC GGGCGTCGCC AACACAATCT ACCGCGCGCA GACCGGCTGG
GAAGTCGCCA AGGGGCTGCG CTGGTTCATG GAGACACGAC TCGGCCCCGC CATCTCCGAC
AGCCACTACA CCCGCAACTC ACTGATGGCC GAGCCGATCG CCAATCTGGC GCAGAAGGAC
ATGCACCGCA CCGACATCCT GCATGAATAT TTCGTCGCGC CGGAGCGGTT CGGCGAGTTC
CTCACCGCGT GCCGCGAGAT CATTCCGAAA GCAAGGGCCG AATTCCTCAA CGTCACCTTG
CGCTACGTCG CCGAGGACAA GACGCCCGCG CTCACCATCG CGCCGGTGCG CCGCATCGCC
GCCGTCATGT CGTTCTCACA GATGACGACA CCGGAAGGCG AGGTCGACAT GCTGCGCACG
ACCGAAGCGC TGATCGATCG CGTCACCGCG ATCGGCGGCG CGTTCTATCT GCCCTATCGC
CTCCATGCCC GCCGCGATCA GGTCGAGCAA GCCTATCCGG CGGCCGCGCG CTTTGTCGCC
GCGAAGCGGC ACTATGATCC GGGTCTGTTG TTCCGCAACG CGATGTGGGA CGCCTATTTC
GCATGA
 
Protein sequence
MISRRRFLHT AATAAALPLA RMPRAQAELR TILNDASRLN PTPVARHVVI SRPTTDDLIA 
RLRAELKEAA AAKRPVTAAV ARHSMGGQSL PRDGTAVTLD GGPIELDTTA QTYRTAAGNR
WWDVIAALDP KGFSPAVMQS NSDFGVGSTF SVNAHGWPVP YGPFGSTVKS IRMLLADGTL
VTCSRTENAE LFGLAMGGYG LFGIIVDLEV EMVPNLLLEP RFERLPPETF AAQFTRAIDG
DGPVKMAYGR MSVSRKAFFD DALLVTFRPA PDAPATLPPA ANSGKLTGVA NTIYRAQTGW
EVAKGLRWFM ETRLGPAISD SHYTRNSLMA EPIANLAQKD MHRTDILHEY FVAPERFGEF
LTACREIIPK ARAEFLNVTL RYVAEDKTPA LTIAPVRRIA AVMSFSQMTT PEGEVDMLRT
TEALIDRVTA IGGAFYLPYR LHARRDQVEQ AYPAAARFVA AKRHYDPGLL FRNAMWDAYF
A