| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1011 |
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| Symbol | |
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| ID | 5150630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1049365 |
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| End bp | 1051767 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640556005 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001237173 |
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| Protein GI | 148252588 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.926102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCGGC CAGAGGGTTG TTCCATGGTC TGCGTAGGTA GCAAGCGGTA TCTCGGTCGC
ATCGTTGCGG CCGCGCTCAT CACGATGCTG GCCGGATGCG GGTCGCCTGA GAAGCGGTCG
CAGGACTATT ATGAACGCGG CATGGCGCTG CTCGAGAAGA ACGACGATCT GAACGCACGC
GTTGCGCTCT CGACCTCCCT CAAATTCAAC AGCAACAGGC TGGACGCGCT CCGCGCTCTC
GCCGGCATCG ATGAGCGGCT CAAGGATACG GGAGCGCTGT TCCAGGTGCT TCGCCGCATC
GTCGAGCTTG ATCCGAAAGA TTTCGACGCT CGGCTCCGTT TGGCCAAGAT CTTGTTCGCC
AACAACGGCA ACGACGCTGC TCTGAAGCTG CTGGATGCCG CCACCGCGGA GGACAAGGGG
CGCGCCGACT ATCACGCCCT GCGCGCGGCA GTCCTGTTCA AGGCTGGCGA TCTGGCTGGG
GCGGTGCGTG ACGCCGAGCA GACGATTCGC CTTGAGCCCG GCAATTTCGA CGCGCTGATG
GTGCTCGCCA GCGCGCAGGT TGCGCGGGGC GACGTCGATG CAGCCCTGCA GATGATCAGC
CAGCTGCCAT CTGCCTCACA AGACGATACG CGCGTTCTTG CCCTGAAGGT GGCCATCTAT
GGCAGGAAGC GCGATCTTGT GCAGACCGAA GCCACGTTGA AGAAGCTGGT CGATTCCAAG
CCCGAATTCC GTGAGCAGCT CGTCAACCTG TATGTCGAGC AGCGCAGGCT CGACGAGGCG
GAAAAGGAGC TGCGCACCGC GGCGGCCGAT AGCTCGGCTG ACGTCGCCAC CAATCTTCGG
CTGGTGCGCT TCCTGGCCAG CTTCCGCAGT CCGGCGGCGG CGCAGGAGCA GCTGGAAAGC
CGCATCAAGG CTGGTGGCGA TGTCTTCCCG TATCAGATGT CCCTCGCTGA TCTCGATTAT
CTGCAGGGCA ATCTGGATCA AGCGACGAGC CTGCTCGAAT CCGTCGTCAA GACCGCTGCC
CCGGATCGCG CCCTTGCGGC CAAGAACAGG CTCGCTCAGG TCTATATCAG GCGCGGCAAT
ACGGAGATGG CCAACAAGCT GGTTTCCGAG GTGTTGGAGA AGGACCGGCG GAACACCGGC
GCGCTCAAAT TGCGCGCCGC CATGCGACTC GATGCGGGCC AGGTGGATGG AGCCATCGCC
GATCTGCGGG AGGCTCTCAA CAACGAGCCC AAATCGCCCG AGTTGCTGTT GATGTTCGGC
GCTGCCTTTG AGCGCAGTGG AAAGGCCGAG CTTGCTGCAC GCCAATATGC CGATGCGGCG
AAGTTCTCGA ACTTCGCACC GCCTTTCGTG CTTCCCTACG CGGCCTTTCT CCAGGGCGTG
CCGGACCTCG CTCAGGCCGA AACCGTCTTG CTGGAGTCGA TCGCGCGGAA CCCGCGCAGC
CTGCCCTTGC TCCAGGCGCT GGCGCAGGTT CGCATCGCCC GCAAGAACTG GACCGGCGCC
CTGGCGGTTG CCGATGTCAT TCGTGGCGCG GAGGACAGCG CCGGAATCGC CGATCAGGTG
CGGGCTGCGG CTCTGGCCGG CCAGAACAAA CTCGAGGCGA GCGTGGCCTC GCTCGAAGAG
GCCCATGCTG CGGCGCCTGA CGCCGTTCGC CCGGCCACGC TGCTGGTCGC CGCCTATCTG
CGCTCCGGCC GGCCGGAAAA GGCAGAGGCT CTGCTCACCG ACATGCTCAA GCGCCGTCCG
GATGAGTCGG CACTCCTCCT GCTGATGGGA CAGACGCAGT CGGCCAAAGG CAGAACCGAC
GAAGCCAAGA CGATCTTCAA GCGGGTCATC ACGCAGCAGC CCAAGAACGA GGCCGCATAT
CGCTCGCTCT CCGAGCTCTA CGCCAACGAG AAGAGCTTCA ACGAGGCGGC CAGCATCCTG
AAGGAAGGGC TCAAGGAGAA CCCCGACAAT TTGAACCTTC GGCTGAGCCA AGCGAGCCTG
TCGCTCGCGC GCGGCGACAA TGACGGGGCG ATCGCGGCTT ACGAGGCCGT GCTGAAGGAC
GACCCGAATG CGCTGCTGGC GGTCAACAAT CTGGCCAGCC TGTTGCTGGA CGAGCGCACC
GACAAAGCGA GCCTCGACCG CGCCGTGCAG CTGGCCGAGC GGCTCAAGAG CTCGGATCTG
CCGCAGTTCC AAGACACCTA TGCCTGGGCA CAGGTGAAGC GCGGCAACAC TGCCGAGGCC
GTCAAGCTTC TCGAAAGTGT CATCGCCCGC GTGCCGAGCT TCTCGGCAGC GCGCTATCAT
CTGGCGCAGG GCTATCTCGC GATGGGACGT GCTGCGCAGG CTAATGAGCA GCTCAAGCTT
GCGCTCGGCG CGGAGCCGGA TGGGACGCCG CTCAAGGACA AGATCCGCGC CGCGATCAGA
TAA
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| Protein sequence | MFRPEGCSMV CVGSKRYLGR IVAAALITML AGCGSPEKRS QDYYERGMAL LEKNDDLNAR
VALSTSLKFN SNRLDALRAL AGIDERLKDT GALFQVLRRI VELDPKDFDA RLRLAKILFA
NNGNDAALKL LDAATAEDKG RADYHALRAA VLFKAGDLAG AVRDAEQTIR LEPGNFDALM
VLASAQVARG DVDAALQMIS QLPSASQDDT RVLALKVAIY GRKRDLVQTE ATLKKLVDSK
PEFREQLVNL YVEQRRLDEA EKELRTAAAD SSADVATNLR LVRFLASFRS PAAAQEQLES
RIKAGGDVFP YQMSLADLDY LQGNLDQATS LLESVVKTAA PDRALAAKNR LAQVYIRRGN
TEMANKLVSE VLEKDRRNTG ALKLRAAMRL DAGQVDGAIA DLREALNNEP KSPELLLMFG
AAFERSGKAE LAARQYADAA KFSNFAPPFV LPYAAFLQGV PDLAQAETVL LESIARNPRS
LPLLQALAQV RIARKNWTGA LAVADVIRGA EDSAGIADQV RAAALAGQNK LEASVASLEE
AHAAAPDAVR PATLLVAAYL RSGRPEKAEA LLTDMLKRRP DESALLLLMG QTQSAKGRTD
EAKTIFKRVI TQQPKNEAAY RSLSELYANE KSFNEAASIL KEGLKENPDN LNLRLSQASL
SLARGDNDGA IAAYEAVLKD DPNALLAVNN LASLLLDERT DKASLDRAVQ LAERLKSSDL
PQFQDTYAWA QVKRGNTAEA VKLLESVIAR VPSFSAARYH LAQGYLAMGR AAQANEQLKL
ALGAEPDGTP LKDKIRAAIR
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