Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0946 |
Symbol | |
ID | 5150190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 979759 |
End bp | 980490 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640555940 |
Product | putative outer membrane protein precursor of unknown function |
Protein accession | YP_001237108 |
Protein GI | 148252523 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.270942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA CATTCAAATT TTCGTCGTCG CTGCTGGTGC TGGCGGCGGT CTGCGGAGCG ATGGGCTCGG CGCAAGCAGC GGACCTGCAG GCGGCGCCGG TCTACACCAA GGCGCCGGTG GTCGAGGCCT GGAATCCCTG GATGATCCGC GTCCGCGCCC TCGGCGTGCT GCCGGACGCG GGCGGCTCCA CCGTGAACGT CACCGGCGTG CCAGCGCTGT CGTCGCCGAA TTCCGGCCTG AAGATCTCCA ACCAGGTCGT GCCGGAACTC GACATCAGCT ACTTCTTCAC CAAGAACATC GCGGCCGAGC TGATCCTCGG CGTCACCCGT CATTCGATCA GCGGCACCGG CACGCTGGAC GGACTGAATA TCGGCAAGGC CTGGCTGCTG CCGCCGACGC TCACGCTGCA ATACCACTTC ACCGATTTCG GTGCCTTCAA GCCCTATATC GGCGCCGGCG TGAACTACAC GGTGTTCTTC AACCAGAGCG CTTCGAACCA GGTGTTCAAT GGTCTTGCAG TGACCAACCT GCATATCTCG AACCAATGGG GCGCAGCTGT CCAGTTCGGC TTCGACTACA TGCTCGACAA GCATTGGGGC CTGAACGTCG ACGTCAAGAA GCTGTGGCTG CAGCCGAACT ACTCGGCCAC CGTCAACGGC GCCATTCCGA TCACTGGCCG CGCCAACATC GATCCCTGGC TGGTCGGCGC CGGCGTCACC TACAAGTTCT GA
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Protein sequence | MNRTFKFSSS LLVLAAVCGA MGSAQAADLQ AAPVYTKAPV VEAWNPWMIR VRALGVLPDA GGSTVNVTGV PALSSPNSGL KISNQVVPEL DISYFFTKNI AAELILGVTR HSISGTGTLD GLNIGKAWLL PPTLTLQYHF TDFGAFKPYI GAGVNYTVFF NQSASNQVFN GLAVTNLHIS NQWGAAVQFG FDYMLDKHWG LNVDVKKLWL QPNYSATVNG AIPITGRANI DPWLVGAGVT YKF
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