Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0916 |
Symbol | |
ID | 5150597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 949206 |
End bp | 950078 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555911 |
Product | putative ABC transporter, permease protein |
Protein accession | YP_001237079 |
Protein GI | 148252494 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.22975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.393426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA GACAGACTCA ACTGCTCGCC CGGGCGCTGC TGTCGCCGGC GGTCATCCTG CTGTTCATCT GGATGATCGT GCCGCTGGCG CTGACCGTCT ACTTCTCGAC CCTGCATTAC AGCCTGCTCG ATCCCGGCTC CGAGAGCTTC GTCGGCTTAG AGAATTTCGA GTATTTCCTC ACCGATCCCG CCTTCCTCGC CTCGCTGCAG AACACGCTGG TCCTGGTCGG CTCGGTCCTG CTGCTCACGA TCGGCCTCGG CATCCCCCTG GCGCTCCTGC TCGACCAGCC GGTGATCGGC CGCAACATCA TCCGCCTGAT GGTGATCGCG CCGTTCTTTG TGATGCCGAC GGTCAGCGCG TTGGTGTGGA AGAACCTCCT GATGCACCCG GTGTCCGGCC TGTTCGCGTG GATCGCGACC TCACTCGGGA TGACGCCGAT CGACTGGTTC ACCGATGCGC CGCTGCTTGC GGTGATCTTC ATCGTCGCCT GGCAATGGCT GCCGTTTGCG ACGCTGATCC TGCTCACCGC GCTGCAGTCG CTCGACGAGG AGCAGAAGGA GGCTGCCGAG ATGGATGGCG CCGGTCCGCT GTCGCGCTTC ATCTATCTGA CCGTGCCGCA CCTGGCACGG CCGATCACGG TGGTGATCCT GATCGAGACC ATTTTCCTGC TCACCGTGTT TGCCGAGATC TTCGTCACCA CCGGCGGCGG ACCTGGGCTG CAGACCACCA ACATCGCCTT CCTGGTCTAT TCGCAGGCGC TGATCCAGTT CGATGTCGGC ACTGCCTCGG CGGGCGGCCT CGTCGCGGTC GTCATCGCCA ATATCGTCGC CTTCTTCCTG GTCCGCATCG TCGGCCGTAA CCTCGAGGCG TAA
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Protein sequence | MATRQTQLLA RALLSPAVIL LFIWMIVPLA LTVYFSTLHY SLLDPGSESF VGLENFEYFL TDPAFLASLQ NTLVLVGSVL LLTIGLGIPL ALLLDQPVIG RNIIRLMVIA PFFVMPTVSA LVWKNLLMHP VSGLFAWIAT SLGMTPIDWF TDAPLLAVIF IVAWQWLPFA TLILLTALQS LDEEQKEAAE MDGAGPLSRF IYLTVPHLAR PITVVILIET IFLLTVFAEI FVTTGGGPGL QTTNIAFLVY SQALIQFDVG TASAGGLVAV VIANIVAFFL VRIVGRNLEA
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