Gene BBta_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0872 
Symbol 
ID5154465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp905398 
End bp905892 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID640555869 
Productputative oxidoreductase with iron-sulfur subunit 
Protein accessionYP_001237039 
Protein GI148252454 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.283899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGA CTGTCAGACT CACCGTCAAC GGTGAGCCGC GAACGCTTGC GCTCGACGAC 
CCCCGCGTCA CGCTGCTCGA CCTGCTGCGC GAGCGCCTCC ACCTCACCGG CACCAAGAAA
GGCTGCGACC GCGGCCAATG CGGCGCCTGC ACCGTCCTCG TCGACGGCCG CCGCATCAAT
TCCTGCCTGA CGCTCGCCGT CAGCCTGGAC GGCGCCGCGA TCACCACCAT CGAAGGCCTG
GCGCAGGGCG ACCAGCTGCA TCCGGTGCAG GAGGCCTTTA TCGCCCATGA CGCCCTGCAA
TGCGGCTTCT GCACGCCAGG CCAGATCATG AGCGCCGTCG GCCTGATCAG CGAGGGCCAC
GCCGGAGATG ATCCGGAGCG CGTGCGCGAA GGCATGAGCG GCAATCTGTG CCGCTGCAGC
GCCTATGTGG GCATCGTCGA AGCGGTGCTC GATGCGCAGG ACAAGCTCAC GGGCAAGACG
GAGCGCGCGG CATGA
 
Protein sequence
MNWTVRLTVN GEPRTLALDD PRVTLLDLLR ERLHLTGTKK GCDRGQCGAC TVLVDGRRIN 
SCLTLAVSLD GAAITTIEGL AQGDQLHPVQ EAFIAHDALQ CGFCTPGQIM SAVGLISEGH
AGDDPERVRE GMSGNLCRCS AYVGIVEAVL DAQDKLTGKT ERAA