Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0860 |
Symbol | |
ID | 5155294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 884830 |
End bp | 888339 |
Gene Length | 3510 bp |
Protein Length | 1169 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555857 |
Product | putative two-component hybrid sensor histidine kinase and response regulator |
Protein accession | YP_001237027 |
Protein GI | 148252442 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0827695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATG ACTGGGGCGT GATCGCCGCT GCGTTCGGCT ATATCGGCTT TCTGTTCCTG GTCGCCAGCC GTGGCAACCG GGCCGGCGAC CGGCGGCCGT CGCGCTTGGC CGGGCTGATC TACCCGCTGT CGCTCGCCAT CTATTGCACG TCCTGGACCT TCTTCGGCTC GGTCGGCTTC GCCTCGCGCA ACAGCGTCGA CTTCCTCGCG ATCTATCTCG GGCCGATCCT GATGGTCGGC GCCTGCACGC CGCTGCTGCG CCGGGTGATC CAGCTCGCCA AGTCGCAAAA CATCACCTCG GTGGCCGACC TGATCGGCGC CCGCTACGGC AAGAGCCAGG CCGTGGCGGC GACGGTGGCG CTGATCGCGA TCATCGGCTC GGTGCCCTAT ATCGCGCTGC AGCTCAAGGC GGTGGCGTCG TCGCTCGAAA CCATCATGGT CGACGACCGC GCCTTCGCTC ATATCCCGAT CGTCGGCGAC ATGGCACTGA TGGTGACGCT CGCAATGGCG ATCTTCGCGG TGCTGTTCGG CACCCGCCAG ACCGACGCCA CCGAGCATCA GCACGGGTTG ATGCTGGCGG TCGCGACCGA ATCGATCATC AAGCTGATCG CCTTCATCGC GGCAGGCGCC TTCGTCACCT TCTGGATGTT CTCGCCGGTC GAGCTGATCG AGCGCGCGAT GAAGTCTCCC GAGGCCGAGC GCGCGCTGGA ATATGTGCCG GGCATCGGCA GCTTCCTGAC CATGACGCTG CTGTCGTTCT GCGCCGCGAT GCTGCTGCCG CGCCAGTTTC ACGTCAGCGT GGTCGAGAAT GCCGACGACG CCGAGGTGTC GCGGGCGCGC TGGATGTTCC CGCTATATCT CGTCGCGATC AATTTGTTCG TGATCCCGAT CGCGCTCGCC GGCCTCATCA CCTTTCCGTT CGGCGCGGTC GACAGCGACA TGTATGTGCT GGCGCTGCCG ATCGAGGCCA ACTCGCAATG GCTGTCGGTG CTGGTCTTCG TCGGCGGCCT GTCGGCCGCG ACCGCCATGG TGATTGTCGA ATGCGTCGCG CTGTCGATCA TGGTGTGCAA CGACATCGTC GTGCCCCTGG TGCTACAGCG CCAGCAGGAG CAGCGCGAGA TCGGGCGCGA CTTCGCAGGC TTCCTGCTCG GCACAAGGCG GATCGCGATC TTCGCCATCA TGGTGATGGC CTATTTCTAC TACCGCGCGC TCGGCACGAC CCAACTCGCC GCGATCGGCC TGTTGTCCTT TGCCGCGATC GCGCAGCTGG CGCCGAGCTT CTTCGGCGGC CTGTTGTGGC GGCGCGCCAC CGCGCGCGGC GCGATGGGCG GCATGCTGGT CGGCTTCGCC GTCTGGCTGT ACACGCTGTT CATCCCGAGC TTCCTCGACA CGTCCACGTC GGGCATTCTG TTCTTGCAGC ATGGTCCGTT CGGGCTCGAG GCGCTCAAGC CGCAGGCGCT GCTCGGCACC GATCTGCCGC CGCTGCTGCA TGGCGTGCTG TGGAGCCTGT CGCTCAACCT GCTCACCTAC ATCGTGCTGT CGCTGGCCCG GCAGCCGTCG TCGATCGAGC TGTTGCAAGC CGACCTGTTC GTGCCGGCAG AGCTGACGCC CAGCGCGCCG AGCTTCCGGC GCTGGCGCTC CACCGTGACC GTGCAGGACA TCCAGACCAC GGTCGGCCAA TATCTCGGCC CCGACCGCGC CCGCGCCTCG TTCGAGGCGT TTGCCGCCCA GCGCAACCTG CCGCTCGATC CGGCCGCGCC CGCCGATTTC GAACTGCTGC GCCATGCCGA GCACCTCATC GCCTCCTCGA TCGGCGCGGC GTCGTCGCGC CTCGTGATGT CGCTCTTGCT GCGCAAGCGC ACGGTGTCGG CGAAGGCGGC GCTGAAGCTG CTCGACGACT CCCACGCCGC GCTGCATTTC AACCGGGAGA TCCTGCAGAC CGCGCTCAAC CATGTGCGCC AGGGCATCGC CGTGTTCGAC GCCGATCTGC AGCTGATCTG CTCCAACGGC CAGTTCGTCG ATCTGCTCGG CCTGCCGCCG CATCTGGTGC AGATCGGCAG CCCCTTGAGA GAAATCCTCG AATTCATGGG CACGATCGGC GCGCCGACCT ATGAGGACAG CGAGGCACTG CTGGCACGCC GGCTCGCCGC CTACACCACC GAGGGCGAGC CCTATCTCGA ACGTCTCGCC GACCGCCACA TGGTGATCGA GGTCCGCACC AATCGCATGC CGGATGGCGG CCTCGTCATC ACCTTCACCG ATGTGACGCC CTCCTTCGAA GCCGCCGAGG CACTGGAGCG CGCCAATGCG ACGCTCGAAA AGCGCGTGCG CGACCGCACC GAGGAGCTGA CGCGGCTGAA CTCCGAGCTC GCGCTGGCCA AGAGCGCCGC CGAGGATGCC AACATCTCCA AGACCCGCTT TCTCGCGGCG GCCAGCCACG ACATCCTGCA GCCGCTGAAT GCCGCGCGGC TCTACATCAC AAGCCTGGTC GAGCGGCAGA CCGCTGGCGA GGAGTCGCGC CTGGTCGAGA ACATCGACGA CTCCCTTGAA GCCATCGAGG AAATCCTGGG CGCGCTGCTC GACATTTCCC GGCTCGATGC CGGCGCGATG ACGCCACAGG TCTCAAGCTT CAAGATGGCC GATCTGATGC GCTCGTTGGA GATCGAATTC GCGCCGGCGG CGCGCGCCAA GGGCCTCGCG CTGACCTTCG TGCCGTGTTC GCTGCCGGTG GAATCAGATC GGCTGCTGCT GCGCCGGCTG CTGCAGAACC TCATCTCCAA CGCCATCAAA TACACGCCCA AGGGCCGCGT GCTGGTCGGC TGCCGCCGCC GCGGCGCATC GCTGCAGATC GGCGTCTGGG ACACCGGCGT CGGCATCCCG CCGGTCAAGC GCGGCGAGAT CTTCAAGGAA TTCCACCGCC TCGAACAGGG CGCGCGCATC GCCCGCGGCC TCGGCCTCGG CCTTTCGATC GTCGAGCGCA TCGCGCGCGT GCTCAATCAC GGCATTGCGC TGGACTCGCA GCCCGGCCGC GGCTCGGCCT TCTCGGTGAC GGTGCCGATC GCCAAGGCGG TCAATCACAC CGCCGCCGTC ACCAGCGCCA CGCCGCTGGC AACGACGCCG ATCTCCGGCG CGCTGATCGT CTGCATCGAG AACGACCCGG CCATTCTCGA CGGCATGCGC ACCCTGCTCA CCGCCTGGGA CGCCGAGGTG ATCGCCGTCC CTGATCCGGA ATCCGCCGTC GAGGCCATCG CCGCCCGCAA CGGCGCCATC ACGGGGCTCC TGGTCGATTA TCACCTCGAT CGCGGCAACG GCATCGCCGC CATCCGCGAC ATCCGCCGCC GCTTCGACGA GGCGCTGCCG GCGATCCTGA TCACCGCCGA CCGCAGCCCC CATGTCCGCG CCGCCGCCCG CGACGAAAAC ATCGCCGTGC TGAACAAGCC GCTGAAGCCT GCGTCGCTGC GCGCGCTGCT CGGGCAATGG CGGATCCAGC AGATGGTGGC GGCGGAATAG
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Protein sequence | MLHDWGVIAA AFGYIGFLFL VASRGNRAGD RRPSRLAGLI YPLSLAIYCT SWTFFGSVGF ASRNSVDFLA IYLGPILMVG ACTPLLRRVI QLAKSQNITS VADLIGARYG KSQAVAATVA LIAIIGSVPY IALQLKAVAS SLETIMVDDR AFAHIPIVGD MALMVTLAMA IFAVLFGTRQ TDATEHQHGL MLAVATESII KLIAFIAAGA FVTFWMFSPV ELIERAMKSP EAERALEYVP GIGSFLTMTL LSFCAAMLLP RQFHVSVVEN ADDAEVSRAR WMFPLYLVAI NLFVIPIALA GLITFPFGAV DSDMYVLALP IEANSQWLSV LVFVGGLSAA TAMVIVECVA LSIMVCNDIV VPLVLQRQQE QREIGRDFAG FLLGTRRIAI FAIMVMAYFY YRALGTTQLA AIGLLSFAAI AQLAPSFFGG LLWRRATARG AMGGMLVGFA VWLYTLFIPS FLDTSTSGIL FLQHGPFGLE ALKPQALLGT DLPPLLHGVL WSLSLNLLTY IVLSLARQPS SIELLQADLF VPAELTPSAP SFRRWRSTVT VQDIQTTVGQ YLGPDRARAS FEAFAAQRNL PLDPAAPADF ELLRHAEHLI ASSIGAASSR LVMSLLLRKR TVSAKAALKL LDDSHAALHF NREILQTALN HVRQGIAVFD ADLQLICSNG QFVDLLGLPP HLVQIGSPLR EILEFMGTIG APTYEDSEAL LARRLAAYTT EGEPYLERLA DRHMVIEVRT NRMPDGGLVI TFTDVTPSFE AAEALERANA TLEKRVRDRT EELTRLNSEL ALAKSAAEDA NISKTRFLAA ASHDILQPLN AARLYITSLV ERQTAGEESR LVENIDDSLE AIEEILGALL DISRLDAGAM TPQVSSFKMA DLMRSLEIEF APAARAKGLA LTFVPCSLPV ESDRLLLRRL LQNLISNAIK YTPKGRVLVG CRRRGASLQI GVWDTGVGIP PVKRGEIFKE FHRLEQGARI ARGLGLGLSI VERIARVLNH GIALDSQPGR GSAFSVTVPI AKAVNHTAAV TSATPLATTP ISGALIVCIE NDPAILDGMR TLLTAWDAEV IAVPDPESAV EAIAARNGAI TGLLVDYHLD RGNGIAAIRD IRRRFDEALP AILITADRSP HVRAAARDEN IAVLNKPLKP ASLRALLGQW RIQQMVAAE
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