Gene BBta_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0856 
Symbol 
ID5155661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp880380 
End bp881393 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID640555853 
Productputative hydrolase, putative exported protein 
Protein accessionYP_001237023 
Protein GI148252438 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0896455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAGC CAAGGAGGAC CCCGATGTTC GCTGTTATCC GCGCCTGCCA AGTCTTCTCG 
ATCCTCGCCG TCTGTCTCAC TGCCACGCTG ACGCACGCCG CCGGTCTGCG AGCGATCGAC
ATTGCCGCGG CGTCCGACGG TCCGGAGATC CATGGCATGG TCTGGTATCC ATGCGCGGAA
CAGCCGACCG AGATCCCCAT CGGCGGCGGC TTCACGTTGA CGGGGGTGAA GGACTGCCCC
CTCATGGGCG GGCATCTGCC GCTCGTTGTC GCCTCGCATG GGCGCGGCGG TTCGCTGCTC
AGCAATCGCG ATACGGCCGA GGCGCTTGCC GACCACGGCT TCGTGGTCGC GGCGATCAAT
CATCCTGGCG ATACCGCGCG GGATCGGAGC AGGTCGGGCG ATCTCTCGGT GTTCGTCGAG
CGGCCCGCCG ACATCAAGCG GCTGATCGAC TTCATGGTCG GCCCGTCGCC CTTCGCGGCC
GACATCGATC GCGACCGCAT CGGCTTCTTC GGCTTTTCGC GCGGCGGCTA CACCGGGCTC
GTGCTGCTCG GTGCCGATCC GGATTGGGCG GGAGCGGCGT CCGATTATTG TCAGCCAATC
CGGAGACTGT TCTGCCAGGA GATCCTGGAC AAACGAACGC CATCGCAACC GCTGACGCAT
GATCCGCGGA TCAAGGCTGC GGTGCTCGCC GATCCCTTGG CGATCTTCCT CTCGCCCGCG
AGCTTCGCCC CGATCAAGAC GCCAGTTCAG CTCTGGGCCT CGAGTCGCGG CGGCGACGGC
GTGCTGCCCA GCCATGTCGC TTTCGTCGAC GCCAATCTTC CGGCAGCACA CGACTATCGC
GTGGTGCCGA ACTCCGGCCA CTTCGCGTTC TTCCTGTGTC CGCCGGCGCT GGTCCAGGGG
CAGTCCGAGC TCTGCGTCGA TGCACCGGGT TTCGACCGTA CGGCCTTCCA CGCTGAGTTC
AACGCCGAGG TGCTTGCGTT CTTCCGGACA TGGCTCGTCC CCACGGCGAA GTGA
 
Protein sequence
MHQPRRTPMF AVIRACQVFS ILAVCLTATL THAAGLRAID IAAASDGPEI HGMVWYPCAE 
QPTEIPIGGG FTLTGVKDCP LMGGHLPLVV ASHGRGGSLL SNRDTAEALA DHGFVVAAIN
HPGDTARDRS RSGDLSVFVE RPADIKRLID FMVGPSPFAA DIDRDRIGFF GFSRGGYTGL
VLLGADPDWA GAASDYCQPI RRLFCQEILD KRTPSQPLTH DPRIKAAVLA DPLAIFLSPA
SFAPIKTPVQ LWASSRGGDG VLPSHVAFVD ANLPAAHDYR VVPNSGHFAF FLCPPALVQG
QSELCVDAPG FDRTAFHAEF NAEVLAFFRT WLVPTAK