| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0830 |
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| Symbol | coxE |
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| ID | 5150282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 858159 |
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| End bp | 859097 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555828 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001236998 |
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| Protein GI | 148252413 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0147164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.292197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCGGTCA TTGATCAGAA CGCCATTGCC GTCGGTCCGC GGATCTCCGA AGCCGATGTC
GGCGATTATC TCGCGCTGCT GAAGCCGCGG GTGATGTCGC TCGTGATCTT CACGGCGCTG
ATCGGCCTGC TGATCGCTCC CGGCCATTTC CACCCGGTGC TCGCGATCAC CTCGCTGCTG
TGCATCGCGG TCGGCGCCGG CGCCTCCGGC GCGCTCAACA TGGCGCTGGA AGGCGACATC
GATTCGCTGA TGTCGCGGAC CGCCAACCGC CCGATCCCGC GCGGCCGCGT CACCCGCCAG
GAGGCGCTGG CCTTCGGCAT CACCCTGTCG TTCTTCTCGG TGCTGACGCT CGGCATCCTG
GTCAATTGGT ATGCCGGCGC GCTGCTGGCG TTCACGATCT TCTTCTATGT CGTCATCTAC
ACGCTGTGGC TGAAGCGCTG GACGGCGCAG AACATCGTCA TCGGCGGCGC CGCCGGCGCC
TTGCCGCCGG TGGTGGCCTG GGTCGCGGCG ACCGGGTCGA TCGCGCCGGA GCCGCTGCTG
CTGTTCCTGA TCATCTTCTT CTGGACCCCG CCGCATTTCT GGGCGCTGGC GCTGTTCCGC
AGCGACGACT ATGCCCGCGC CGGCGTGCCG ATGCTCCCCG TCGTTGCCGG TCCTGATGCG
ACCCGGCTGC AGATCCTGCT CTACACGATC CTCCTGGTGG CGATTGCCGC CGCGCCCTGG
CCGCTCGGCT ATTTCGACGC CGTCTACGGC GTCGTCTCGC TGGCGCTTGG CGCCGGCATG
CTGTGGTTTG CGATTGAGGT GTTCCGCAAG CGCGAACGCA GCCAATCGCT GCGCGCCAAC
CGCAAGCTGT TCGCCTTCTC GATCCTGTAT CTGTTCGCGC TGTTCGCGAC GCTCGGGCTC
GAGGCGGTCG CGCGCATGAT CGCGCCGTTG ATCTGGTAA
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| Protein sequence | MSVIDQNAIA VGPRISEADV GDYLALLKPR VMSLVIFTAL IGLLIAPGHF HPVLAITSLL
CIAVGAGASG ALNMALEGDI DSLMSRTANR PIPRGRVTRQ EALAFGITLS FFSVLTLGIL
VNWYAGALLA FTIFFYVVIY TLWLKRWTAQ NIVIGGAAGA LPPVVAWVAA TGSIAPEPLL
LFLIIFFWTP PHFWALALFR SDDYARAGVP MLPVVAGPDA TRLQILLYTI LLVAIAAAPW
PLGYFDAVYG VVSLALGAGM LWFAIEVFRK RERSQSLRAN RKLFAFSILY LFALFATLGL
EAVARMIAPL IW
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