| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0829 |
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| Symbol | coxA |
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| ID | 5150281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 856417 |
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| End bp | 858030 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640555827 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001236997 |
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| Protein GI | 148252412 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.12188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.348177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA ACGTAGCGAC CCATAGCAGC CATGACGATC ACGCGCACGA CCATCCGACC
GGATGGCGGC GCTGGCTGTA TTCGACCAAC CACAAAGACA TCGGCACGAT GTACCTGATC
TTCGCCGTGT TCGCCGGCCT GATCGGCGGC GCGATGTCGG TCGCGATCCG CATCGAGTTG
ATGTATCCGG GCGTGCAGCT CTTCCATGAG AGCCACACCT ACAACGTGTT CGTGACCTCG
CACGGTCTGA TCATGATCTT CTTCATGGTC ATGCCGGCGA TGATCGGCGG CTTCGGCAAC
TGGATGGTGC CGCTGATGAT CGGCGCGCCG GACATGGCGT TCCCGCGCAT GAACAACATC
TCGTTCTGGC TGCTGCCAGC CTCGTTCGCG CTGCTGCTGC TGTCGACCTT CGTCGAGGGC
GAGCCGGGTG CCAACGGCGT CGGCGCCGGC TGGACGATGT ATGTGCCATT GTCGACGTCA
GGCCATCCGG GACCCGCGGT CGACTTCGCG ATCCTGTCGC TGCATCTCGC CGGTGCCTCG
TCGATCCTGG GCTCGATCAA CTTCATCACC ACCATCTTCA ACATGCGCGC GCCGGGCATG
ACCCTGCACA AGATGCCGCT GTTCGTGTGG TCGGTGCTGG TGACGGTGTT CCTGCTGCTG
CTGTCGCTGC CGGTGCTCGC CGGCGCGATC ACCATGATGC TGACGGACCG CAATTTCGGC
ACCACCTTCT TCGCTCCCGA AGGCGGCGGC GACCCGGTGC TGTTCCAGCA TCTGTTCTGG
TTCTTCGGTC ACCCCGAAGT GTACATCCTG ATCCTGCCCG GCTTCGGCAT GATCAGCCAG
ATCGTGTCGA CCTTCTCGCG CAAGCCCGTG TTCGGCTATC TCGGCATGGC CTACGCCATG
GTCGCGATCG GCGGCATCGG CTTCGTGGTC TGGGCGCACC ACATGTACAC GGTCGGCATG
TCGTCGGCGA CGCAGGCCTA TTTCGTCGCT GCCACCATGG TGATCGCTGT GCCGACCGGC
GTGAAGATCT TCTCCTGGAT CGCCACGATG TGGGGCGGCT CGATCGAGTT CCGCGCGCCG
ATGCTGTGGG CCGTGGGCTT CATCTTCCTG TTCACGGTCG GTGGCGTCAC CGGCGTCGTG
CTGGCGAATG CCGGCGTCGA CCGCGTGCTG CAGGATACCT ATTACGTCGT CGCGCACTTC
CACTACGTGC TGTCGCTCGG CGCCGTGTTC GCCATCTTCG CCGGCTGGTA CTACTGGTTC
CCGAAGATGT TCGGCTACAT GTACAATGAG GGCATCGCCA AGCTGCACTT CTGGGTCACC
TTCATCGGCG TGAACCTGGT GTTCTTCCCG CAGCACTTCC TCGGCCTGTC CGGCATGCCG
CGTCGCTACG TCGACTATCC CGATGCCTTT GCCGGCTGGA ATCTGGTGTC GTCGATCGGC
TCCTACATCT CGGCGGTCGG CGTCCTGATC TTCATCTACG GTGTCGTCGA CGCCTTCATG
CGCAAGCAGC AGGCCGCCGC CAACCCGTGG GGACCGGGCG CGACCACCCT GGAATGGACG
CTGTCGTCGC CGCCTCCGTT CCACCAGTTC GAGGTGCTGC CGAAGGTGCA GTGA
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| Protein sequence | MATNVATHSS HDDHAHDHPT GWRRWLYSTN HKDIGTMYLI FAVFAGLIGG AMSVAIRIEL
MYPGVQLFHE SHTYNVFVTS HGLIMIFFMV MPAMIGGFGN WMVPLMIGAP DMAFPRMNNI
SFWLLPASFA LLLLSTFVEG EPGANGVGAG WTMYVPLSTS GHPGPAVDFA ILSLHLAGAS
SILGSINFIT TIFNMRAPGM TLHKMPLFVW SVLVTVFLLL LSLPVLAGAI TMMLTDRNFG
TTFFAPEGGG DPVLFQHLFW FFGHPEVYIL ILPGFGMISQ IVSTFSRKPV FGYLGMAYAM
VAIGGIGFVV WAHHMYTVGM SSATQAYFVA ATMVIAVPTG VKIFSWIATM WGGSIEFRAP
MLWAVGFIFL FTVGGVTGVV LANAGVDRVL QDTYYVVAHF HYVLSLGAVF AIFAGWYYWF
PKMFGYMYNE GIAKLHFWVT FIGVNLVFFP QHFLGLSGMP RRYVDYPDAF AGWNLVSSIG
SYISAVGVLI FIYGVVDAFM RKQQAAANPW GPGATTLEWT LSSPPPFHQF EVLPKVQ
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