Gene BBta_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0813 
Symbol 
ID5153357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp839671 
End bp840258 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content66% 
IMG OID640555811 
ProductPadR family transcriptional regulator 
Protein accessionYP_001236981 
Protein GI148252396 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.403384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG GCGACGCCAT CCTTGCCTGC CTCACCGAAC ATCCCATGAC GGGCTACGAG 
CTCGCCAAGA CCTTCGATTC CTCGATCGGG TTCTTCTGGA AGACCGACCA TCAGCAGATC
TATCGCGAAT TGTCGCGACT GCGCGATCGC GGCTATATCC AGGGCCGCGA GGTGGTGCAG
ACCGGCAAGC CGAACAAGCT CGTCTACACG CTGACGCCCG AAGGGCGCGC AGCCTTCCGC
AGCTGGGCGG CACGGCCGAG TACGCCGGCC TCGGTCAAGG ACGATCTCCT GGTTCGTCTC
TATGCGCTGG GCGCGGCCGA CATCGCTCCG ATCCGGGCCG ATCTGATGGC GCGGCTCGAA
CATCATCGCG ACCGCGCCGA GCGCTACGAT CGCATCCTCA AGAAGCATTA TGCGGACGGC
AGCGTTGCGC CGGCCGACAT GGGCAAGCTG CTCAATCTGC GCCTCGGGCT GCGTCACGAG
CGCATGGTGG CGGAATGGTG CGAGGAGGCG ATCACCGCCC TGTCGGCCAT CTCCAACAGC
GGCAGCGTGC GGCCGCTCGA TCCCCCCTCA CGGGAAACTG CGGGCTGA
 
Protein sequence
MALGDAILAC LTEHPMTGYE LAKTFDSSIG FFWKTDHQQI YRELSRLRDR GYIQGREVVQ 
TGKPNKLVYT LTPEGRAAFR SWAARPSTPA SVKDDLLVRL YALGAADIAP IRADLMARLE
HHRDRAERYD RILKKHYADG SVAPADMGKL LNLRLGLRHE RMVAEWCEEA ITALSAISNS
GSVRPLDPPS RETAG