Gene BBta_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0807 
Symbol 
ID5154403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp828933 
End bp829859 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID640555805 
Productputative permease 
Protein accessionYP_001236975 
Protein GI148252390 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0899504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT ACCTCCCGAT CGCCGACATA CCCGTCAACA TCTTCCTGTT GCTGGCGATG 
GGCGCGGCCG TCGGCTTCGT TTCCGGCATG TTCGGGATCG GCGGCGGCTT CCTGATGACG
CCGCTCTTGA TCTTCGTCGG CATCACGCCC GCGGTCGCCG TCGCCTCGGT GTCCAGCCAC
ATCGCCGCAT CGTCGTTTTC CGGCGCGCTG TCCTATTGGC GGCGCCGCGC GATCGATCCC
TCGCTGGCTT TGGTGCTGAT GATCGGCGGC ACGCTGGGCA CCGCGCTCGG CGTGTCGACC
TTCACGCTGC TGCGTTCACT CGGCCAGCTC GACCTGATGA TCGCGCTGTC CTATGTCGCG
CTGCTGACAA GCGTCGGCGG CGTGATGTTC TGGGAAGGCC TGCGCGCCAT CATGCGGGCG
CGCCAGGGCG CGCTGCCGAC GGTGCGACGG CCGGGCAGTC ACGTCTGGAT ACACGGCCTG
CCGCTGAAGA TGCGCTTCAA GCGATCCAAG ATCTACGTCT CCGTCATTCC CGTCATCGGA
ATCGGGCTGC TCATCGGCTT CCTCGGCGCC GTGATGGGCA TTGGCGGCGG CTTCATCCTG
GTGCCGCTGC TGATCTATAT CCTGCGTGTG CCGACCTCGA CGGTGATCGG CACCTCGATG
GTGCTGACGC TCGCGACCAT GATGATTGCG ACCATGCTGC ACGCGGTGAG CAACCATCTG
GTCGACGCCG TGCTGGCGCT GATCCTGATG GTCGGCGGCG TCACCGGCGC GCAATTCGGG
GCCCGCGCCG GCCAGATGAT CCGCGGCGAG CAGCTGCGGC TCCTGCTCGG CCTGCTGATC
CTCGCGGTCG GCATCCGCTT CGCGGTCGAG CTCGTGATCC GCCCCGCCGA CCTGTTCACG
ATCCGTGAAA CCGAGCAGAG CCAATGA
 
Protein sequence
MQIYLPIADI PVNIFLLLAM GAAVGFVSGM FGIGGGFLMT PLLIFVGITP AVAVASVSSH 
IAASSFSGAL SYWRRRAIDP SLALVLMIGG TLGTALGVST FTLLRSLGQL DLMIALSYVA
LLTSVGGVMF WEGLRAIMRA RQGALPTVRR PGSHVWIHGL PLKMRFKRSK IYVSVIPVIG
IGLLIGFLGA VMGIGGGFIL VPLLIYILRV PTSTVIGTSM VLTLATMMIA TMLHAVSNHL
VDAVLALILM VGGVTGAQFG ARAGQMIRGE QLRLLLGLLI LAVGIRFAVE LVIRPADLFT
IRETEQSQ