| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0798 |
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| Symbol | |
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| ID | 5154054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 816857 |
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| End bp | 818803 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555796 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001236966 |
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| Protein GI | 148252381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.109452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0163574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TCGCCGAGCT GCTCGACCGC CTCGCTTATG AGCCGGGCCG CAACAACAAG
CTGCGCCTGC TGACCGCATA TTTCCGCGAG GCCGAGGACC CCGACCGCGG CTACGCGCTG
GGCGCGCTGA CCGGCGCATT GTCGTTCAAG CACGCCAAGC CGGCGCTGAT CCGCGACCTC
ATCGCCGCCC GCACCGACCC GGTGCTGTTC GCGCTGTCGT ATGATTACGT CGGTGACCTC
TCCGAGACCG TCGCGCTGAT GTGGCCGAAG GGCGGTGCGC ATCAGCAGCA GCATGTCGCG
GGGTCCCCCC CTCCCCAGCC CTCCCCCACA AGGGGGGAGG GAGCGCAGTT GCGCGTGGCG
CTTGCACCTG GGATGCCATC GGCAATGGGA CCAACGGCAT CGACAGGACG TGCGGCATCC
ACCGCCGGCA CGGCCTCGAA CGTGGCTCCA ACAGACATCC TCCGTTCCTC AGCGCCCGCC
CTCTCCATTC CCTCCCCCCT TGTGGGGGAG GGTCAGGGAG GGGGTGTCCC CACGGGCAGT
CTCCCGGAAG CGCTCCCACC AGGAGCTCAC GCAGCAGGAC ACAACAATCC GCCACCCCCG
ACGCTCACCG AGGTTGTCAC CACCTTGCGC ACGCTCGGCA AGACCGAGAT GCCGCGGCAG
CTGGCGCAAT GGCTCGACGA GCTCGACGAG ACCGGACGCT GGGCGCTGCT GAAGCTGGTC
ACCGGCGCAC TTCGCATCGG CATCTCGGCA CGTCTCGCCA AGACCGCGGC GGCCGCGCTC
GGCGACAAGG ACCCGCATGA GGTCGAGCTG GTCTGGCCGG GGCTGTCGCC GCCTTATCTC
GACCTGTTCG CCTGGCTCGA GGGCCGCGGC GACAAACCCG TCAACAGCGA TCCCGCGCCG
TTCCGGCCCG TGATGCTCGC GCATGCCGTC GAAGACGACG ATTTCGAAAG CATGAATGCG
GCCGACTACA TCGCCGAATG GAAATGGGAC GGCATCCGCG TGCAGGCGGT CAGCGGCCGC
GACAGCGACG GATGCATCGT GACGCGGCTG TATTCGCGCA GCGGCGAGGA CATCACACCG
AGCTTCCCTG ATCTGTTGCC ATCCCTGCAT CTGCCCGGCG CGCTCGACGG CGAGCTGCTG
GTGGTGCGCG AGAAGCGCGT GCAGAGCTTC AACGTGCTGC AGCAGCGGCT GAACCGCAAG
ACCGTGTCGC CAAAGCTGAT GAAGGAATAT CCGATCCATC TGCGCGCCTA CGACCTGCTC
AGCGACGAAG GCAGCGATCT GCGCGAGCGG CCCTTCGCCG AACGGCGCGA ACAGCTCGAG
GCGTTCATCC GGCGGTTGGA CGATCCGCGC GTCGACCTGT CGCCGACGAT CGCCTTCGCG
AGCTGGGACG AACTGAAAGC GGCGCGCGCC AATCCCGCAT CGGCCGGCGC CGGCGACGAT
GCCGAAGCGG TCGAAGGCGT GATGTTGAAG CGGCGCGACG CGCCCTATCT GCCGGGCCGG
CCCAAAGGAC AATGGTGGAA GTGGAAGCAC GATCCGCACA TCATCGATGC CGTGCTGATG
TATGCGCAGC GCGGCCACGG CAAGCGCTCA TCCTACTACT CCGACTACAC GTTCGGTGTG
TGGACGGCGG GTGAAGCCGG CGATCAGCTC GTCCCTGTCG GCAAGGCCTA TTTCGGCTTC
ACCGACGAGG AACTGCTGCA GATCGATCGT TTCGTCCGCC GCAACACCAC CGAGAAGTTC
GGCCCTGTCC GCCATGTCGT GCACGAGCCC GAGCAGGGGC TGGTGCTGGA GGTTGCCTTC
GAGGGCCTGC AGCGCTCGCC GCGGCATAAA TCCGGCATCG CGATGCGCTT CCCGCGCATC
AACCGCCTGC GCTGGGACAA GCCGCCGCGG GATGCCGACC GGCTGGAAAC GCTGGAACGC
CTGCTGAAAA GCGAGACGGC GGGGTGA
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| Protein sequence | MNRFAELLDR LAYEPGRNNK LRLLTAYFRE AEDPDRGYAL GALTGALSFK HAKPALIRDL
IAARTDPVLF ALSYDYVGDL SETVALMWPK GGAHQQQHVA GSPPPQPSPT RGEGAQLRVA
LAPGMPSAMG PTASTGRAAS TAGTASNVAP TDILRSSAPA LSIPSPLVGE GQGGGVPTGS
LPEALPPGAH AAGHNNPPPP TLTEVVTTLR TLGKTEMPRQ LAQWLDELDE TGRWALLKLV
TGALRIGISA RLAKTAAAAL GDKDPHEVEL VWPGLSPPYL DLFAWLEGRG DKPVNSDPAP
FRPVMLAHAV EDDDFESMNA ADYIAEWKWD GIRVQAVSGR DSDGCIVTRL YSRSGEDITP
SFPDLLPSLH LPGALDGELL VVREKRVQSF NVLQQRLNRK TVSPKLMKEY PIHLRAYDLL
SDEGSDLRER PFAERREQLE AFIRRLDDPR VDLSPTIAFA SWDELKAARA NPASAGAGDD
AEAVEGVMLK RRDAPYLPGR PKGQWWKWKH DPHIIDAVLM YAQRGHGKRS SYYSDYTFGV
WTAGEAGDQL VPVGKAYFGF TDEELLQIDR FVRRNTTEKF GPVRHVVHEP EQGLVLEVAF
EGLQRSPRHK SGIAMRFPRI NRLRWDKPPR DADRLETLER LLKSETAG
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