Gene BBta_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0708 
Symbol 
ID5149335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp726063 
End bp727475 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content66% 
IMG OID640555709 
Productcytochrome bd ubiquinol oxidase, subunit I (cydA, QxtA) 
Protein accessionYP_001236881 
Protein GI148252296 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATGT TCGGTTTGGA TGCGGTGGAG CTGGCGCGCG CGCAATTCGC CTTCACGGTC 
ACCTTCCACA TCATCTTCCC CGCCTTCTCG ATCGGGCTTG CCTCCTACCT TGCGGTGCTC
GAGGCGCTGT GGCTGTGGAC CGGCCGCGAC GTCTATCTCA ACGTCTTCAA TTACTGGCTC
AAGATCTTCG CCATCGCCTT TGCGATGGGC GTCGTGTCCG GCATCGTGAT GTCCTATCAG
TTCGGCACCA ACTGGTCGGT CTATTCCGAC AAGGTCGGAC CGGTGATCGG CCCCCTGATG
GCCTATGAGG TGCTCACCGC GTTCTTCCTC GAAGCCGGCT TCCTCGGCGT GATGCTGTTC
GGCCTCAAGC GCGTCGGCCC CAAGCTGCAT TTCCTCGCCA CCCTGATGGT CGCGGTGGGC
ACGCTGATCT CGGCATTCTG GATCCTCTCG GCCAATTCCT GGATGCAGAC GCCGGCCGGC
TACGCCGTCA ACGCCGACGG CCAGTTCGTC TCGGTCGACT GGCTCAAGGT GATCTTCAAT
CCGTCCTTCC CCTACCGCCT CGTCCACATG GTGCTGGCGG CCTATCTCAC CACCTCGCTG
GTGGTCGGCG CCGTCGGCGC CTGGCACCTG CTGCGCAATC CGCATCTGCC GGGGCCGCGC
GTGATGTTCT CGATGGCGAT GTGGATGGCC GCGCTGGTGG CGCCGCTGCA GATCCTGGTC
GGTGATCAGC ATGGCCTCAA CACGCTCGAG CACCAGCCGG TGAAGATCAT GGCCATGGAG
GGCCATTTCG AGAGCCACAA GGACGGCGCG CCGCTGTATC TGTTCGGCTG GCCCGACCAA
GCGAAGGGCG AGCTGAAATG GGCGATCGGC ATTCCCAAAT TCGGCTCGCT GATCCTCAAG
CACCAGATCG ACGCGCCGAT GGCCGGGCTT GACACCGTGC CGCGCCAGGA CTGGCCGCCG
GTGCCGATCA CCTTCTGGTC GTTCCGCATC ATGGTCGGGC TGGGAATGCT GATGCTGGCG
CTCGGCCTGT TCAGCCTGTG GGAGCGCTGG CGCGGGCGGC TGTACATCAA TCGGGGCCTG
CACCGCTTTG CGATCGCGAT GGGGCCGGCC GGCTTCGTCG CTGTGATCGC CGGCTGGGTG
ACCACCGAGA CCGGCCGCCA GCCCTTCACC GTGTACGGGC TGCTGCGCAC CGCCGATTCC
GTGTCGCCGC TGGCCGCACC GGCCGTCGGC GCGTCGCTGC TGGCCTTCAT CATCGTGTAT
TTCATCATCT TCGCAGCCGG CGTGCTGTAC ATCCTGCGCC TGATGGCCGA GCCGCCGCAT
GCCGGCGAGG CGGGACCGAG CAGCGAGCCG CCGCTCCGCA GCGCCGGCGT GACGCCGGCG
GCGGGCGTGG TGCAGGGAGC GATCGGATCA TGA
 
Protein sequence
MRMFGLDAVE LARAQFAFTV TFHIIFPAFS IGLASYLAVL EALWLWTGRD VYLNVFNYWL 
KIFAIAFAMG VVSGIVMSYQ FGTNWSVYSD KVGPVIGPLM AYEVLTAFFL EAGFLGVMLF
GLKRVGPKLH FLATLMVAVG TLISAFWILS ANSWMQTPAG YAVNADGQFV SVDWLKVIFN
PSFPYRLVHM VLAAYLTTSL VVGAVGAWHL LRNPHLPGPR VMFSMAMWMA ALVAPLQILV
GDQHGLNTLE HQPVKIMAME GHFESHKDGA PLYLFGWPDQ AKGELKWAIG IPKFGSLILK
HQIDAPMAGL DTVPRQDWPP VPITFWSFRI MVGLGMLMLA LGLFSLWERW RGRLYINRGL
HRFAIAMGPA GFVAVIAGWV TTETGRQPFT VYGLLRTADS VSPLAAPAVG ASLLAFIIVY
FIIFAAGVLY ILRLMAEPPH AGEAGPSSEP PLRSAGVTPA AGVVQGAIGS