| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0666 |
|---|
| Symbol | |
|---|
| ID | 5151964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 675720 |
|---|
| End bp | 676952 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640555668 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001236840 |
|---|
| Protein GI | 148252255 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.112312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCGA TGACGACCAG GACTCTGCTC TCTCTCGCGG CCGCGGCCGC CTTCTCCGTG
CTCGCGAGCC AGAGTGCGCT CGCCCAGAAG AAATACGACA CCGGGGTGAC CGACACCGAG
ATCAAGATCG GCAATGTCGA GGCCTATAGC GGCCCGGCCT CGGCCTACGG CATCATCGGC
AAGACCGAGG AGGCCTATTT CAAGATGATC AACGATCAGG GCGGCATCAA CGGCCGGCGG
ATCAACTTCA TCTCCTATGA CGACGGCTAC AGCCCGCCGA AAACGGTCGA GCAGGTCCGC
AAGCTGATCG AGAGCGACGA AGTGTTCTTG GTGTTCAACG CGCTGGGCAC GCCGACCCAG
ACCGCCGTGC AGAAATATCA CAACGCCAAG AAGGTACCGC AGCTGTTCCT GGCCACCGGG
GCCAGCAAGT GGAATGAGCC GAAGGAATTC CCCTGGACCA TGGGCTTTCA GCCCAGCTAC
CGCGTCGAGG CCCGGATCTT CGCAAAATAC ATTCTCAAGG AGAAGCCGAA CGCGAAGATC
GCAATCTTCT ATGCCAATGA CGATTTCGGC AAGGACTACC TGCTCGGCAT CAAGGAGGTG
CTGGGCGACA AGGCCAAGAC CATGATCGTC GCCGAGGAGA GCTACGAGAC ATCGGAGCCC
TCGATCGATG CCCATATCGT CAAGGTCAAG GGCACTGGCG CGGATGTATT CGTCAACATC
GCGACGCCAA AATTCGCGGC GCAGGCGATC AAGAAGATCG CCGAGCTCGA CTGGAAGCCG
ATGCACCTGA TGACCGACGT ATCGATCTCG ATCGGCGCCG TGATGAAGCC AGCCGGCCTT
GACGCCTCCG AGGGCGTGCT CTCCGCCGGC TACCTCAAGG ACCCGTCGGA TCCGCAGTGG
AAGGATGACG AGGGCATGGA GAAGTTCATG GCCTTCATCG ACAAGTACAT GCCCGGCGCC
AACATCTCCG ACGCCAATCT TGCCTATGGC TATGCCGCGG CGCAGACGAT GGTGCAGACC
CTGAAGCAGT GCGGCGACAA TCTCACTCGC GAGAATGTCA TGAAGCAGGC CGCCAGCCTG
AAGGACTTCG CGCCGGATAC GCTGATCCCC GGCATCAAGG TCAACACCGG TCCCAACGAC
TTCGCCCCGA TCGAGCAGCT GAAGATGATG CAGTTCAAGG GCGGCAAATG GGACCTGTTC
GGCGACATCA TCAGCGCGGA TGTCGGAGGC TAG
|
|---|
| Protein sequence | MLPMTTRTLL SLAAAAAFSV LASQSALAQK KYDTGVTDTE IKIGNVEAYS GPASAYGIIG
KTEEAYFKMI NDQGGINGRR INFISYDDGY SPPKTVEQVR KLIESDEVFL VFNALGTPTQ
TAVQKYHNAK KVPQLFLATG ASKWNEPKEF PWTMGFQPSY RVEARIFAKY ILKEKPNAKI
AIFYANDDFG KDYLLGIKEV LGDKAKTMIV AEESYETSEP SIDAHIVKVK GTGADVFVNI
ATPKFAAQAI KKIAELDWKP MHLMTDVSIS IGAVMKPAGL DASEGVLSAG YLKDPSDPQW
KDDEGMEKFM AFIDKYMPGA NISDANLAYG YAAAQTMVQT LKQCGDNLTR ENVMKQAASL
KDFAPDTLIP GIKVNTGPND FAPIEQLKMM QFKGGKWDLF GDIISADVGG
|
|---|
| |