Gene BBta_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0617 
Symbol 
ID5150671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp618925 
End bp620799 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content64% 
IMG OID640555623 
Producthypothetical protein 
Protein accessionYP_001236795 
Protein GI148252210 
COG category[S] Function unknown 
COG ID[COG4529] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TATCGGTCGC AATCATCGGG GCCGGCTCGC GCGCGCTCAA CGTGATCGAA 
CATCTGGCTT GGCGGTTGTC GTCAGACTCG GCGCTTCCCG GTGTCGTGGT GCATCTCATC
GATCCAGGCG AGCCGTGCGC CGGCGTGCAT GTCGCCAATC AGTCCAGCCA ACTGCTCACG
AATACGCTTG CGTCACAGGT GACGATGTTC TCGCCGACGA ACAGGCTCGA GCCAAAGTCG
CCGCCGAGCG GGCCGTCCTT CACAGAATGG GCGCGTCGTC AGGGTTACCG CCGGTTCGGC
ACCGAGTATC GTCAGGCCGC CGGAGGTGAG GAGATCGGAG AGCTCGATTA TCTTCCGCGC
GCCATGCTGG GCGAGTATCT CCGCGACGCA TTCAGGATGG TGCTGCAGCG AGCGCCGAAA
GCGATGACGG TGAAACACCA CCGGACGACC GCCATCGACG TCTCGGAGCA TCCGCGCCGC
GTGCATCTCG AAAACGGTGA CCGCATCCCG TGGGACGCGT TGATCATCGC GACGGGGCAT
TGCGAGCTCC AGCCCTCGCC CGAAGAGCTC AAAATCCAGT CGTTCGTGAC ACGTAATCGG
TCGCGAAACA GTCGGCTCAG ATACATCGGC AATCCGTACC CCACCTCGCG ATTGGCGGAG
ATCTCCCGGT CCGACGTGGT GCTCGTTCAG GGTCTCGGAT TGACGGCGTA CGATGTCATT
GCCGACCTGA CCGCCGGTCG AGGAGGCGGG TTCGTCGAGA CAGGCGGCGG GCTGCGCTAC
ATCCGTTCCG GCGAGGAACC GCTCATTCGT CTGTTCTCGC GCCAGTCGCT TCCCTACGGA
GCGAGAGGGG TCAACCAGAA GGGGGTCGAC GGAGGGCATG TCGCTCAATT CCTCACCAGA
CCAGCTGTCG ACGCCATTCG GGCGCGATCT GCCGCCGGCG GAATGGGGAA GCTCGACTTC
CTGACCGACA TCCTGCCGCT GATCCGGAAG GACATGGCGT TCGCGTATCG GTGCGCCGAG
CAGCGGCGAA AGATCGATGT GGAGGACTTC CGGCCCACGC CGACGGAAGA CGCGATCATC
GACCGGATCT TCGAGCCGAA GGAGCTGTTG TCTTGCGGCG GACTGAGTGA ATTGCGATCA
CGCGTCGTGA AGTACCTGCG CGACGATTTG GCGGAGGCCG TCCGAGGCAA TGTGGACAGC
CCGTTGAAAG CGGCGACGGA TGCCATCCGG GATCTCCGAG ACGGTCTGTC TGCGGCCATC
GAGTTCGGCG GACTGACGCC GGAGTCCCAT CGTTACGTCG TCGAGGTGTT TGTTCCGTTG
ACGAATCGGA TCACATTCGG TCCGCCCTTG AGGCGCAACG CTGAATTGCT GGCCCTGATC
GAGGCCGGCG TGGTCGACTG GGCAGGCGGC GCGGGAGCCA GGATTCGCCT TGATGAAGGT
CTTGCGCGCT TCGTGGTTCA GACGACGTTC GGATCGAAAG AGGAGTGCGT CGCTGGTGAC
GTTCTCGTCA CGGCGCGGGT GTTTGGTCAC CGACCGCTCG AGGACGTTCG GCCGTTGTCG
CGAAATCTGG TGGAGCGGGG CATCGCCCGG CCATTCTGCA ACGGCAACTA TCATCCGCAC
GGTCTCGACG TGGATCGCGG CCTGCGGCTG CTGCGAGCTG ACGGATCACC AAATCGAAGC
ATCTGGGGAA TCGGCTTCGT CACCGAAGGG CCGCGCTTTC ATACCCATGC ACTCCCGCGG
CCCGGCCGGC GCTCGAGCCA ACTGGCCGAT GCTGCGCGAC TCGTGGATGA TCTCCTCGCG
TCGTTCGCAT CGGGAGCAGC GCCGCATGCT GCGGCGGCTC AAGCTGAAGT CCTGGCTGAA
GAAGGGGTGC GGTGA
 
Protein sequence
MSEISVAIIG AGSRALNVIE HLAWRLSSDS ALPGVVVHLI DPGEPCAGVH VANQSSQLLT 
NTLASQVTMF SPTNRLEPKS PPSGPSFTEW ARRQGYRRFG TEYRQAAGGE EIGELDYLPR
AMLGEYLRDA FRMVLQRAPK AMTVKHHRTT AIDVSEHPRR VHLENGDRIP WDALIIATGH
CELQPSPEEL KIQSFVTRNR SRNSRLRYIG NPYPTSRLAE ISRSDVVLVQ GLGLTAYDVI
ADLTAGRGGG FVETGGGLRY IRSGEEPLIR LFSRQSLPYG ARGVNQKGVD GGHVAQFLTR
PAVDAIRARS AAGGMGKLDF LTDILPLIRK DMAFAYRCAE QRRKIDVEDF RPTPTEDAII
DRIFEPKELL SCGGLSELRS RVVKYLRDDL AEAVRGNVDS PLKAATDAIR DLRDGLSAAI
EFGGLTPESH RYVVEVFVPL TNRITFGPPL RRNAELLALI EAGVVDWAGG AGARIRLDEG
LARFVVQTTF GSKEECVAGD VLVTARVFGH RPLEDVRPLS RNLVERGIAR PFCNGNYHPH
GLDVDRGLRL LRADGSPNRS IWGIGFVTEG PRFHTHALPR PGRRSSQLAD AARLVDDLLA
SFASGAAPHA AAAQAEVLAE EGVR