Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0617 |
Symbol | |
ID | 5150671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 618925 |
End bp | 620799 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640555623 |
Product | hypothetical protein |
Protein accession | YP_001236795 |
Protein GI | 148252210 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.108776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGA TATCGGTCGC AATCATCGGG GCCGGCTCGC GCGCGCTCAA CGTGATCGAA CATCTGGCTT GGCGGTTGTC GTCAGACTCG GCGCTTCCCG GTGTCGTGGT GCATCTCATC GATCCAGGCG AGCCGTGCGC CGGCGTGCAT GTCGCCAATC AGTCCAGCCA ACTGCTCACG AATACGCTTG CGTCACAGGT GACGATGTTC TCGCCGACGA ACAGGCTCGA GCCAAAGTCG CCGCCGAGCG GGCCGTCCTT CACAGAATGG GCGCGTCGTC AGGGTTACCG CCGGTTCGGC ACCGAGTATC GTCAGGCCGC CGGAGGTGAG GAGATCGGAG AGCTCGATTA TCTTCCGCGC GCCATGCTGG GCGAGTATCT CCGCGACGCA TTCAGGATGG TGCTGCAGCG AGCGCCGAAA GCGATGACGG TGAAACACCA CCGGACGACC GCCATCGACG TCTCGGAGCA TCCGCGCCGC GTGCATCTCG AAAACGGTGA CCGCATCCCG TGGGACGCGT TGATCATCGC GACGGGGCAT TGCGAGCTCC AGCCCTCGCC CGAAGAGCTC AAAATCCAGT CGTTCGTGAC ACGTAATCGG TCGCGAAACA GTCGGCTCAG ATACATCGGC AATCCGTACC CCACCTCGCG ATTGGCGGAG ATCTCCCGGT CCGACGTGGT GCTCGTTCAG GGTCTCGGAT TGACGGCGTA CGATGTCATT GCCGACCTGA CCGCCGGTCG AGGAGGCGGG TTCGTCGAGA CAGGCGGCGG GCTGCGCTAC ATCCGTTCCG GCGAGGAACC GCTCATTCGT CTGTTCTCGC GCCAGTCGCT TCCCTACGGA GCGAGAGGGG TCAACCAGAA GGGGGTCGAC GGAGGGCATG TCGCTCAATT CCTCACCAGA CCAGCTGTCG ACGCCATTCG GGCGCGATCT GCCGCCGGCG GAATGGGGAA GCTCGACTTC CTGACCGACA TCCTGCCGCT GATCCGGAAG GACATGGCGT TCGCGTATCG GTGCGCCGAG CAGCGGCGAA AGATCGATGT GGAGGACTTC CGGCCCACGC CGACGGAAGA CGCGATCATC GACCGGATCT TCGAGCCGAA GGAGCTGTTG TCTTGCGGCG GACTGAGTGA ATTGCGATCA CGCGTCGTGA AGTACCTGCG CGACGATTTG GCGGAGGCCG TCCGAGGCAA TGTGGACAGC CCGTTGAAAG CGGCGACGGA TGCCATCCGG GATCTCCGAG ACGGTCTGTC TGCGGCCATC GAGTTCGGCG GACTGACGCC GGAGTCCCAT CGTTACGTCG TCGAGGTGTT TGTTCCGTTG ACGAATCGGA TCACATTCGG TCCGCCCTTG AGGCGCAACG CTGAATTGCT GGCCCTGATC GAGGCCGGCG TGGTCGACTG GGCAGGCGGC GCGGGAGCCA GGATTCGCCT TGATGAAGGT CTTGCGCGCT TCGTGGTTCA GACGACGTTC GGATCGAAAG AGGAGTGCGT CGCTGGTGAC GTTCTCGTCA CGGCGCGGGT GTTTGGTCAC CGACCGCTCG AGGACGTTCG GCCGTTGTCG CGAAATCTGG TGGAGCGGGG CATCGCCCGG CCATTCTGCA ACGGCAACTA TCATCCGCAC GGTCTCGACG TGGATCGCGG CCTGCGGCTG CTGCGAGCTG ACGGATCACC AAATCGAAGC ATCTGGGGAA TCGGCTTCGT CACCGAAGGG CCGCGCTTTC ATACCCATGC ACTCCCGCGG CCCGGCCGGC GCTCGAGCCA ACTGGCCGAT GCTGCGCGAC TCGTGGATGA TCTCCTCGCG TCGTTCGCAT CGGGAGCAGC GCCGCATGCT GCGGCGGCTC AAGCTGAAGT CCTGGCTGAA GAAGGGGTGC GGTGA
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Protein sequence | MSEISVAIIG AGSRALNVIE HLAWRLSSDS ALPGVVVHLI DPGEPCAGVH VANQSSQLLT NTLASQVTMF SPTNRLEPKS PPSGPSFTEW ARRQGYRRFG TEYRQAAGGE EIGELDYLPR AMLGEYLRDA FRMVLQRAPK AMTVKHHRTT AIDVSEHPRR VHLENGDRIP WDALIIATGH CELQPSPEEL KIQSFVTRNR SRNSRLRYIG NPYPTSRLAE ISRSDVVLVQ GLGLTAYDVI ADLTAGRGGG FVETGGGLRY IRSGEEPLIR LFSRQSLPYG ARGVNQKGVD GGHVAQFLTR PAVDAIRARS AAGGMGKLDF LTDILPLIRK DMAFAYRCAE QRRKIDVEDF RPTPTEDAII DRIFEPKELL SCGGLSELRS RVVKYLRDDL AEAVRGNVDS PLKAATDAIR DLRDGLSAAI EFGGLTPESH RYVVEVFVPL TNRITFGPPL RRNAELLALI EAGVVDWAGG AGARIRLDEG LARFVVQTTF GSKEECVAGD VLVTARVFGH RPLEDVRPLS RNLVERGIAR PFCNGNYHPH GLDVDRGLRL LRADGSPNRS IWGIGFVTEG PRFHTHALPR PGRRSSQLAD AARLVDDLLA SFASGAAPHA AAAQAEVLAE EGVR
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