Gene BBta_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0580 
Symbol 
ID5155857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp587976 
End bp589292 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content63% 
IMG OID640555592 
Productputative phage integrase 
Protein accessionYP_001236764 
Protein GI148252179 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCT GGACGCGTGC GCGGTCCTTC GCCATAATCC GCCCACCATT TGTGGTCTGG 
ATTGTGGACA TGGCCAGGGT GCTCGGAAGG CTGACGGCTC TGAAGGTGGA GAAGCTCAAG
GAGGCGGGCA TGTACGCCGA CGGCGGCGGG CTCTATCTGC GCGTCACGAA GGACGGCACC
AAGAACTGGG TTTTCCGGTT CATGCTCAAT AAAAGGCCGC GCTGGATGGG ATTGGGGCCC
GTCGCGCTCT TTGGCCTTCA GGAAGCGCGC GGTAGGGCCC TGGATGCTCG TCGGCTACGC
CATGACGGTG TCGATCCGAT CGAGACCCGC CGTGCCAGCC GGATACAGCA ACGCCTGGAA
GCCGCAAAGG CGATCTCGTT CGACGAGTGC TGTTCCGCCT ATATCAAGGC CAATCGCGCC
GGTTGGCGGA ACGCAAAGCA CGGCGCCCAG TGGGAATCGA CCTTAGCGAC CTATGCCAGT
CCGGTCGTCG GCGCACTGCC CGTGCAGACG ATCGACACGG GACTGGTTTT GAAGGTCTTG
GAGCCGATCT GGGCGGATAA GCCTGAGACT GCGAGCAGGG TCCGGCAGAG GATCGAAAGG
GTGCTCGACT GGGCGCGAGT TCGTGGATAC CGGACCGGTG AGAACCCGGC CAGATGGAAG
GGCCATCTGG ACAAACTCCT GCCTGCGACT GCGAAGGTCC GTCGGGTCGT GCATCATGCC
GCGTTACCAT ACGGCGAGAT GCCGGGCTTC CTAGCCGACT TGCGCCAGCA AGAAGGCGTT
GCGGCCCGTG CTCTCGAATT TCTCGTCCTT ACCGCCGGCA GAACTGGTGA GGTCATCGGC
GCTCGCTGGA CCGAGGTGAA CCGGCACGAC AAGACATGGC AAGTACCAGG CGAGCGGATG
AAGGCTGGCA GGGAGCATCG CGTTCCGCTC TCTGCCCGCG CGCTGGCCAT CCTTGAAGAG
ACCTATGCGC TGCGGCACGC CGATGATGGG TTCTTATTCC CCGGTGCCAA GCACGGCAAG
CCGCTCTCGA ATATGGCGTT CCTGATGTTG CTGCGACGGA TGAGCAGGGA TGACCTGACG
GCACACGGTT TCCGCTCCAG TTTCCGCGAC TGGGTCGCCG AGCGCACGAA TTTTCCCGCG
GAGGTCGCTG AAATTGCGCT GGCACATACG GTCAGCGACA AGACCGTCGC CGCCTACAGT
CGCACCGACT TGTTTGAACG TCGGCGGCGG TTGATGCAGC AGTGGTCGGT CTTTTGCACG
GCCATGCCGC AGGAGAAGCG AGGCAACGTA ACGGCGCTGT CGAGGCCACA ATCCTAG
 
Protein sequence
MLLWTRARSF AIIRPPFVVW IVDMARVLGR LTALKVEKLK EAGMYADGGG LYLRVTKDGT 
KNWVFRFMLN KRPRWMGLGP VALFGLQEAR GRALDARRLR HDGVDPIETR RASRIQQRLE
AAKAISFDEC CSAYIKANRA GWRNAKHGAQ WESTLATYAS PVVGALPVQT IDTGLVLKVL
EPIWADKPET ASRVRQRIER VLDWARVRGY RTGENPARWK GHLDKLLPAT AKVRRVVHHA
ALPYGEMPGF LADLRQQEGV AARALEFLVL TAGRTGEVIG ARWTEVNRHD KTWQVPGERM
KAGREHRVPL SARALAILEE TYALRHADDG FLFPGAKHGK PLSNMAFLML LRRMSRDDLT
AHGFRSSFRD WVAERTNFPA EVAEIALAHT VSDKTVAAYS RTDLFERRRR LMQQWSVFCT
AMPQEKRGNV TALSRPQS