Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0580 |
Symbol | |
ID | 5155857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 587976 |
End bp | 589292 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555592 |
Product | putative phage integrase |
Protein accession | YP_001236764 |
Protein GI | 148252179 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTCT GGACGCGTGC GCGGTCCTTC GCCATAATCC GCCCACCATT TGTGGTCTGG ATTGTGGACA TGGCCAGGGT GCTCGGAAGG CTGACGGCTC TGAAGGTGGA GAAGCTCAAG GAGGCGGGCA TGTACGCCGA CGGCGGCGGG CTCTATCTGC GCGTCACGAA GGACGGCACC AAGAACTGGG TTTTCCGGTT CATGCTCAAT AAAAGGCCGC GCTGGATGGG ATTGGGGCCC GTCGCGCTCT TTGGCCTTCA GGAAGCGCGC GGTAGGGCCC TGGATGCTCG TCGGCTACGC CATGACGGTG TCGATCCGAT CGAGACCCGC CGTGCCAGCC GGATACAGCA ACGCCTGGAA GCCGCAAAGG CGATCTCGTT CGACGAGTGC TGTTCCGCCT ATATCAAGGC CAATCGCGCC GGTTGGCGGA ACGCAAAGCA CGGCGCCCAG TGGGAATCGA CCTTAGCGAC CTATGCCAGT CCGGTCGTCG GCGCACTGCC CGTGCAGACG ATCGACACGG GACTGGTTTT GAAGGTCTTG GAGCCGATCT GGGCGGATAA GCCTGAGACT GCGAGCAGGG TCCGGCAGAG GATCGAAAGG GTGCTCGACT GGGCGCGAGT TCGTGGATAC CGGACCGGTG AGAACCCGGC CAGATGGAAG GGCCATCTGG ACAAACTCCT GCCTGCGACT GCGAAGGTCC GTCGGGTCGT GCATCATGCC GCGTTACCAT ACGGCGAGAT GCCGGGCTTC CTAGCCGACT TGCGCCAGCA AGAAGGCGTT GCGGCCCGTG CTCTCGAATT TCTCGTCCTT ACCGCCGGCA GAACTGGTGA GGTCATCGGC GCTCGCTGGA CCGAGGTGAA CCGGCACGAC AAGACATGGC AAGTACCAGG CGAGCGGATG AAGGCTGGCA GGGAGCATCG CGTTCCGCTC TCTGCCCGCG CGCTGGCCAT CCTTGAAGAG ACCTATGCGC TGCGGCACGC CGATGATGGG TTCTTATTCC CCGGTGCCAA GCACGGCAAG CCGCTCTCGA ATATGGCGTT CCTGATGTTG CTGCGACGGA TGAGCAGGGA TGACCTGACG GCACACGGTT TCCGCTCCAG TTTCCGCGAC TGGGTCGCCG AGCGCACGAA TTTTCCCGCG GAGGTCGCTG AAATTGCGCT GGCACATACG GTCAGCGACA AGACCGTCGC CGCCTACAGT CGCACCGACT TGTTTGAACG TCGGCGGCGG TTGATGCAGC AGTGGTCGGT CTTTTGCACG GCCATGCCGC AGGAGAAGCG AGGCAACGTA ACGGCGCTGT CGAGGCCACA ATCCTAG
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Protein sequence | MLLWTRARSF AIIRPPFVVW IVDMARVLGR LTALKVEKLK EAGMYADGGG LYLRVTKDGT KNWVFRFMLN KRPRWMGLGP VALFGLQEAR GRALDARRLR HDGVDPIETR RASRIQQRLE AAKAISFDEC CSAYIKANRA GWRNAKHGAQ WESTLATYAS PVVGALPVQT IDTGLVLKVL EPIWADKPET ASRVRQRIER VLDWARVRGY RTGENPARWK GHLDKLLPAT AKVRRVVHHA ALPYGEMPGF LADLRQQEGV AARALEFLVL TAGRTGEVIG ARWTEVNRHD KTWQVPGERM KAGREHRVPL SARALAILEE TYALRHADDG FLFPGAKHGK PLSNMAFLML LRRMSRDDLT AHGFRSSFRD WVAERTNFPA EVAEIALAHT VSDKTVAAYS RTDLFERRRR LMQQWSVFCT AMPQEKRGNV TALSRPQS
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