Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0545 |
Symbol | |
ID | 5156111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 544551 |
End bp | 545276 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555559 |
Product | putative nuclease-like protein |
Protein accession | YP_001236732 |
Protein GI | 148252147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0379373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGA AAACAGTTTC CCTCGCCCTG CTCCTGCTGC TGCCGTCGCT TGCTCACGCC GCGGAGATCA CCGGCATTCC CAAGATCCGC GAGGCCGACG GGATCACGAT CGGCACGACG CGGATCCGGC TTGGCGGCAT TGACGCGCCG TCGGTCGATC AGCTGTGCCT GAACAAGGAT GGCGAGCGCT GGACCTGCGG AGTGGCGGCG CGCGACGAAC TGATCAAGCA TGCCGACGGC AAGAGCTGGG TGTGCCATCC ACGCGCGATC GACCGCCGCG GCCGCCAAGT GGCGCGCTGC GATGTCGATG GCGAGGACAT CCAGAAATGG CTGGTGCGCA ACGGCTGGGC GCTGGCCTAT CGCACCGTCT CGCACGACTA CGAGCCCGAG GAGGCAGAGG CCCGCACGGC CAAGGCCGGC ATGTGGCAGG GCGCCTTCAT CGCGCCATGG GACTGGCGGG TGCGCAACAA GAAGACCACG ATCCTCGGCG CCACCAAGCC GCCGGAGAGT GCCCGCAACA TCCTGCTCGC CTCGGCCTCG GGCCCGGTTG CGCCGTCACC CGACTGCACC ATCAAGGGCA ATGTCAATAG CGCCGGCGAG TGCATCTATC ACACGCCGCA GAGCCGCTGG TACGCCCAGA TCAAGATGCA TGTGTCGAAG GGCACGCGCT GGTTCTGCTC GGTCGAGGAG GCCGAGGCCG CCGGTTGCCG CGAAACCCGG CGCTGA
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Protein sequence | MPMKTVSLAL LLLLPSLAHA AEITGIPKIR EADGITIGTT RIRLGGIDAP SVDQLCLNKD GERWTCGVAA RDELIKHADG KSWVCHPRAI DRRGRQVARC DVDGEDIQKW LVRNGWALAY RTVSHDYEPE EAEARTAKAG MWQGAFIAPW DWRVRNKKTT ILGATKPPES ARNILLASAS GPVAPSPDCT IKGNVNSAGE CIYHTPQSRW YAQIKMHVSK GTRWFCSVEE AEAAGCRETR R
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