Gene BBta_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0545 
Symbol 
ID5156111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp544551 
End bp545276 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID640555559 
Productputative nuclease-like protein 
Protein accessionYP_001236732 
Protein GI148252147 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0379373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGA AAACAGTTTC CCTCGCCCTG CTCCTGCTGC TGCCGTCGCT TGCTCACGCC 
GCGGAGATCA CCGGCATTCC CAAGATCCGC GAGGCCGACG GGATCACGAT CGGCACGACG
CGGATCCGGC TTGGCGGCAT TGACGCGCCG TCGGTCGATC AGCTGTGCCT GAACAAGGAT
GGCGAGCGCT GGACCTGCGG AGTGGCGGCG CGCGACGAAC TGATCAAGCA TGCCGACGGC
AAGAGCTGGG TGTGCCATCC ACGCGCGATC GACCGCCGCG GCCGCCAAGT GGCGCGCTGC
GATGTCGATG GCGAGGACAT CCAGAAATGG CTGGTGCGCA ACGGCTGGGC GCTGGCCTAT
CGCACCGTCT CGCACGACTA CGAGCCCGAG GAGGCAGAGG CCCGCACGGC CAAGGCCGGC
ATGTGGCAGG GCGCCTTCAT CGCGCCATGG GACTGGCGGG TGCGCAACAA GAAGACCACG
ATCCTCGGCG CCACCAAGCC GCCGGAGAGT GCCCGCAACA TCCTGCTCGC CTCGGCCTCG
GGCCCGGTTG CGCCGTCACC CGACTGCACC ATCAAGGGCA ATGTCAATAG CGCCGGCGAG
TGCATCTATC ACACGCCGCA GAGCCGCTGG TACGCCCAGA TCAAGATGCA TGTGTCGAAG
GGCACGCGCT GGTTCTGCTC GGTCGAGGAG GCCGAGGCCG CCGGTTGCCG CGAAACCCGG
CGCTGA
 
Protein sequence
MPMKTVSLAL LLLLPSLAHA AEITGIPKIR EADGITIGTT RIRLGGIDAP SVDQLCLNKD 
GERWTCGVAA RDELIKHADG KSWVCHPRAI DRRGRQVARC DVDGEDIQKW LVRNGWALAY
RTVSHDYEPE EAEARTAKAG MWQGAFIAPW DWRVRNKKTT ILGATKPPES ARNILLASAS
GPVAPSPDCT IKGNVNSAGE CIYHTPQSRW YAQIKMHVSK GTRWFCSVEE AEAAGCRETR
R