| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0522 |
|---|
| Symbol | |
|---|
| ID | 5156094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 512671 |
|---|
| End bp | 514239 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640555536 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001236709 |
|---|
| Protein GI | 148252124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0559459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.932507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCATCC AGAAGGGAAT GACAATGTCA GGTATCGTAC TCTCGGCGTC GGTGCGCCAG
AATCTGCTCT CGCTCCAGTC GACGGCGCAG CTCCTCGCCA CCACGCAGAA CAACCTCTCC
ACGGGCAAGA AGGTCAACTC GGCGCTCGAC AACCCGACCA ACTTCTTCAC CGCGCAGGGA
CTCGACAACC GCGCTTCCGA CATCTCCAAT CTGCTCGATG GTATCGGCAA CGGCGTGCAG
GTTCTGCAGG CCGCCAACAC CGGCATCACC TCGCTGCAGA AGCTCGTCGA CAGCGCCAAG
TCGATCGCCA ACCAGGTGCT GCAGAGCGCC GTCGGCTACT CCACCAAGTC GACCGTGACG
TCGGCTGCGC TGACCGGTGC GACCGCCACC AGTCTGATCG GTGCCAGCAC CACTGCCGTC
ACCGGCTCCG CCGTACTGAA CGACAACACC TCGACCGCCG TGGCGATCAC CGGCTCCACC
AAGCTGTCGG GTACCCCGGG CACCTCGTCG AACGACCTGG CGTCCAGCAT CACCACCGGC
GACACGCTGG TCGTGAACGG CACCACCTTC ACCTTTATCG CCGGCACGTC CTCGTCCGGC
ACCAATATCG GCGTCGGTGA CACCGTTACG AACCTGCTGT CGACCATCCA GAGCGCGACC
GGCGTCACCT CGTCGATCAC GGCTGGCGCG ATCACGCTGA CGCCGCCGGC GGCAGGGCTG
ACATTGTCCG GTACGTCGCT GGCCAAGCTC GGTCTCAGCG CGGTCGGCAA TTCCCTGTCC
GGGCAGACGC TGACAATCGC CGCCACAGGA GGTGGCACGG CGACCAGTGT CACGTTCGGT
CTTGGGACAG GGCAGGTCAA CTCGTTGAAC GATCTCAACG CGAAGCTTGC GGCCAACAAC
CTGCAGGCCA CTGTCGCCTC CGCGACCGGT AAGATCTCCA TCACGACCAC CAACGACGCA
GCGTCTTCGA CGATCGGTGC GATCGGTGGT ACGGCGGCGG CCTCCAGCCA GTCCTTCAAC
GGCCTGACGG CGGCGGCTCC GGTGGCTGAT GCGACCGCCC AGTCGCAGCG TGCAAGCTTG
GTTGCGCAGT ACAACAACGT GCTGGCGCAG ATCAACACGA CGGCAGCCGA CGCGTCGTTC
AACGGCATCA ACCTGCTGAA CGGCGACACG CTGAAGCTGA CCTTCAACGA GACCGGCAAG
TCCACGCTGT CGATCACCGG CGTGACCTTC AACACCGGCG GCCTGGGTCT GTCGACCCTG
ACCTCGGGCA CCGACTTCCT CGACAACAAC TCGGCGAACA AGGTGATCAA GGTGCTCAAC
ACCGCGAGCT CCACGCTCCG GGACGAGGCG TCGACCTTGG GTTCGAACCT GTCGGTGGTG
CAGGTCCGTC AGGACTTCAA CAAGAACCTG ATCAACGTGC TGCAGACCGG TTCGTCGAAC
CTGACTCTGG CCGACACCAA TGAGGAAGCG GCCAACAGCC AGGCGCTGTC GACCCGCCAG
TCGATCGCGG TGTCCGCGCT GTCGCTCGCC AACCAGTCGC AGGCGAGCGT GCTGCAGCTC
CTGCGCTAA
|
|---|
| Protein sequence | MFIQKGMTMS GIVLSASVRQ NLLSLQSTAQ LLATTQNNLS TGKKVNSALD NPTNFFTAQG
LDNRASDISN LLDGIGNGVQ VLQAANTGIT SLQKLVDSAK SIANQVLQSA VGYSTKSTVT
SAALTGATAT SLIGASTTAV TGSAVLNDNT STAVAITGST KLSGTPGTSS NDLASSITTG
DTLVVNGTTF TFIAGTSSSG TNIGVGDTVT NLLSTIQSAT GVTSSITAGA ITLTPPAAGL
TLSGTSLAKL GLSAVGNSLS GQTLTIAATG GGTATSVTFG LGTGQVNSLN DLNAKLAANN
LQATVASATG KISITTTNDA ASSTIGAIGG TAAASSQSFN GLTAAAPVAD ATAQSQRASL
VAQYNNVLAQ INTTAADASF NGINLLNGDT LKLTFNETGK STLSITGVTF NTGGLGLSTL
TSGTDFLDNN SANKVIKVLN TASSTLRDEA STLGSNLSVV QVRQDFNKNL INVLQTGSSN
LTLADTNEEA ANSQALSTRQ SIAVSALSLA NQSQASVLQL LR
|
|---|
| |