Gene BBta_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0505 
Symbol 
ID5149273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp497944 
End bp498381 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID640555522 
Productputative plasmid stability protein 
Protein accessionYP_001236695 
Protein GI148252110 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.294814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTCC TGCTCGATAC CAACGTGCTC TCGGAGGTTC GCCGCCCGGT CCCCGATCGG 
CGCGTGATCG GCTGGCTCGA TACCGTCGAC GAGGATCGGG TCTTCATCAG CACGGCTTCA
CTTGCGGAGC TCCAACGAGG CATCGAACTT TTGGACGCAG GCCGCCGACG GACGGCTCTC
GCGGCCTGGC TCAGTCATGA CCTGCCGTCG CGATTTGCCG GTCGGATCCT CGCGATCGAT
CAGGCCGTCG CGCTGCGCTG GGGTGACGTG ATGGCGGCAG GCCATCGACG CGGTATCGCG
CTCTCGGTGA TGGATGGCTT CTTCGCAGCC ACCGCTTTGG TGCACGGACT CACTCTCGTC
ACGCGCAACG TGAAAGACTT CGCCGCGACC GGAACGCCCC TTTTCAATCC CTGGACAGAC
GACGACGACG TGGGCTGA
 
Protein sequence
MNFLLDTNVL SEVRRPVPDR RVIGWLDTVD EDRVFISTAS LAELQRGIEL LDAGRRRTAL 
AAWLSHDLPS RFAGRILAID QAVALRWGDV MAAGHRRGIA LSVMDGFFAA TALVHGLTLV
TRNVKDFAAT GTPLFNPWTD DDDVG